Gene
RNA
| Item | Value |
|---|---|
| gene id | G1515538 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 9634603 ~ 9634819 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1734657 | True | 217 | lncRNA | 0.39 | 1 | 9634603 | 9634819 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495570 | LOC106573853 | coding | upstream | 83608 | 9501508 ~ 9550995 (+) |
| LOC110495547 | ptprn | coding | upstream | 334960 | 9256574 ~ 9299643 (+) |
| LOC110497024 | dnpep | coding | upstream | 379198 | 9246827 ~ 9255405 (+) |
| LOC100653484 | LOC106573841 | coding | upstream | 474596 | 9134562 ~ 9160007 (+) |
| LOC110523347 | LOC106595274 | coding | upstream | 505945 | 9115618 ~ 9128658 (+) |
| LOC110527259 | LOC106575807 | coding | downstream | 107285 | 9742104 ~ 9765236 (+) |
| LOC110527263 | LOC106598167 | coding | downstream | 208746 | 9843565 ~ 9845412 (+) |
| LOC110527266 | LOC106595105 | coding | downstream | 216634 | 9851453 ~ 9854072 (+) |
| LOC110497036 | LOC106575870 | coding | downstream | 222032 | 9856851 ~ 9859254 (+) |
| LOC110495578 | LOC106575871 | coding | downstream | 228563 | 9863382 ~ 9864362 (+) |
| G1515536 | LOC106575804 | non-coding | upstream | 2771 | 9631612 ~ 9631832 (+) |
| G1515492 | NA | non-coding | upstream | 63012 | 9571354 ~ 9571591 (+) |
| G1515445 | NA | non-coding | upstream | 117096 | 9514364 ~ 9517507 (+) |
| G1515444 | NA | non-coding | upstream | 122769 | 9510777 ~ 9511834 (+) |
| G1515432 | NA | non-coding | upstream | 146092 | 9486867 ~ 9488511 (+) |
| G1515543 | NA | non-coding | downstream | 8923 | 9643742 ~ 9644594 (+) |
| G1515546 | NA | non-coding | downstream | 15437 | 9650256 ~ 9650471 (+) |
| G1515550 | NA | non-coding | downstream | 21538 | 9656357 ~ 9656586 (+) |
| G1515551 | NA | non-coding | downstream | 24914 | 9659733 ~ 9659936 (+) |
| G1515553 | NA | non-coding | downstream | 32852 | 9667671 ~ 9667898 (+) |
| G1515005 | cbs | other | upstream | 631477 | 9000398 ~ 9003126 (+) |
| LOC110495395 | LOC106574852 | other | upstream | 954393 | 8677497 ~ 8682383 (+) |
| LOC110495394 | LOC106574832 | other | upstream | 958092 | 8623967 ~ 8676626 (+) |
| G1514274 | NA | other | upstream | 1057778 | 8576493 ~ 8576825 (+) |
| LOC110528849 | LOC105022557 | other | upstream | 1130267 | 8498352 ~ 8506254 (+) |
| G1515776 | NA | other | downstream | 339709 | 9974528 ~ 9975306 (+) |
| G1515853 | NA | other | downstream | 535283 | 10170102 ~ 10171956 (+) |
| G1516136 | NA | other | downstream | 684491 | 10310107 ~ 10327138 (+) |
| G1516637 | NA | other | downstream | 1381946 | 11016765 ~ 11017089 (+) |
| LOC118941092 | LOC106575823 | other | downstream | 1451266 | 10978682 ~ 11092554 (+) |
