XLOC_003447 (BX072564.1)


Basic Information

Item Value
gene id XLOC_003447
gene name BX072564.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 24580579 ~ 24581114 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006746
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttggtttatgTGATTTACGAAGACATTTCATATGAATACACGCCACATTATGAGGACATTTTCAATTATGAGGACATGGTCGGAGTCCTCATAATTTTAGCAATGTAGAAGTGCTTCTTTAATGTAGAAGAGCTCAAATCCAAAATTTCTCCACATGACTTTATAGTTCACATAAACCTGATTTTGTGTATTACGTGTGTATTCGACATGCGCCCCTGTAGCCCGGACTGAGTACTGCATCCCCTCATTAATTATGCATGCGAGTGTATGAAATCgcggcatgtgattggctgaccaTCAAACGTCCTCATAATAACTGTATCTGTCAAACATCTGTGTAaacaataatgattaaaaaatagttttaaatatgtataaatatgaattacgttctaattaaataataaaaatccccCACTACCTTTATAAgatcaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099925

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006746 True 536 processed_transcript 0.38 1 24580579 24581114

Neighbor

gene id symbol gene type direction distance location
XLOC_003446 rbm39a coding upstream 224486 24339362 ~ 24356093 (+)
XLOC_003445 rem1 coding upstream 248527 24313931 ~ 24332052 (+)
XLOC_003442 NA coding upstream 269934 24120291 ~ 24310645 (+)
XLOC_003444 AL831791.1 coding upstream 401641 24178823 ~ 24178938 (+)
XLOC_003443 NA coding upstream 402928 24176418 ~ 24177651 (+)
XLOC_003448 syt6b coding downstream 39628 24620742 ~ 24664031 (+)
XLOC_003449 gpr25 coding downstream 121994 24703108 ~ 24704437 (+)
XLOC_003450 inavab coding downstream 135723 24716837 ~ 24756816 (+)
XLOC_003451 rnpep coding downstream 177853 24758967 ~ 24783118 (+)
XLOC_003452 cyb5r1 coding downstream 205264 24786378 ~ 24799675 (+)
XLOC_003369 CR854846.2 misc upstream 8457497 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 11868583 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 11886316 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 11894980 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 11900551 12679732 ~ 12680028 (+)
XLOC_003441 FP102969.1 non-coding upstream 429362 24116083 ~ 24151217 (+)
XLOC_003440 NA non-coding upstream 496991 24061156 ~ 24083588 (+)
XLOC_003463 NA non-coding downstream 478348 25059462 ~ 25060098 (+)
XLOC_003466 NA non-coding downstream 600743 25181857 ~ 25228195 (+)
XLOC_003467 NA non-coding downstream 675698 25256812 ~ 25266235 (+)
XLOC_003487 NA non-coding downstream 1248256 25829370 ~ 25830337 (+)
XLOC_003488 CR318604.1 non-coding downstream 1496833 26077947 ~ 26078061 (+)

Expression


Co-expression Network