G1516209


Basic Information

Item Value
gene id G1516209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10455617 ~ 10456361 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735474
GGAAAGatgaacacacagacatggaaagatgaacacacagacATGGAAAGatgaacacacagacatggaaagatgaacacacagacatggacaggtgaacacacagacatggacaaattaacacacagacagatgtacacacagacagatgaacacaccgacagataaacacacagacagaagaacacacagacagatgaacaAACAGACAGttgaacacacagaaacagacagataaacacacagacagataaacacacagacagataaacacacagacagatgaacacacagacagatgaacacatagacagatgaacacacagacagataaacacacagacagatgaacacaca
>TU1735475
aacagacagacagataaacacacagacagataaacacacagacagatgaacacacagacagatgaacacatagacagatgaacacacagacagataaacacacagacagatgaacacaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735474 False 357 lncRNA 0.41 4 10455617 10456361
TU1735475 True 120 lncRNA 0.40 2 10456130 10456361

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 87039 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 306488 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 321489 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 333807 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 562382 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 400008 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 488042 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 504383 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 505424 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 517467 10973828 ~ 10979399 (+)
G1516207 NA non-coding upstream 4294 10451029 ~ 10451323 (+)
G1516206 NA non-coding upstream 5832 10449583 ~ 10449785 (+)
G1516202 NA non-coding upstream 10349 10445067 ~ 10445268 (+)
G1516198 NA non-coding upstream 13948 10441446 ~ 10441669 (+)
G1516197 NA non-coding upstream 14310 10441107 ~ 10441307 (+)
G1516219 NA non-coding downstream 26086 10482447 ~ 10484731 (+)
G1516226 NA non-coding downstream 48911 10505272 ~ 10506175 (+)
G1516288 NA non-coding downstream 72864 10529225 ~ 10529505 (+)
G1516292 NA non-coding downstream 78015 10534376 ~ 10534636 (+)
G1516297 NA non-coding downstream 81912 10538273 ~ 10540127 (+)
G1516136 NA other upstream 128479 10310107 ~ 10327138 (+)
G1515853 NA other upstream 283661 10170102 ~ 10171956 (+)
G1515776 NA other upstream 480311 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1452491 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1775407 8677497 ~ 8682383 (+)
G1516637 NA other downstream 560404 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 629724 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1176706 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1186428 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1483701 11940062 ~ 11941897 (+)

Expression


Co-expression Network