G1516219


Basic Information

Item Value
gene id G1516219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10482447 ~ 10484731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735487
gagagagacatcacactggGGTCAGACTGGGCTAGCTGCTTTCAGtgtgagagagacatcacactggGATCAGACTGGGCTAGCTGCTTTCAGTGTGGGAGAGACATTACATTGGGGTCTGACTGGGCTGTCTGCTTTCAGTGTGGGAGAGACATTACATTGGGGTCAACTAAGTAGTTGACTGTCCTCCACTTTCTCCCTGTTCTTCTCTGAGGGAATTCTCTAGTGGTAACAGAACGGTAACAATAGGACATGAGTTGGtacactaccactaggacatgagttagtacaCTACCACTAGGGCATGAGTTAGtacactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaccactaggacatgagttagtatactaccactaccactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagtatacttccactaggacatgagttagtatactaccactaccactaccactaggacatgagttagtatactaccactaccactaggacatgagttagtatactaccactaggacatgagtttgtatactaccactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatatGTTAGTATACTTtcactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagtacactaccactaggacatgagtttgtatactaccactaccactaggacatgagttattatactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatacGTTAGTATACTTTCACTACCACTAtgacatgagttagtatactaccactaggacatgagttagtatactaccactaggagatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaccactaggacatgagttactatactaccactaggacgtgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttactatactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaccactaccactaggacatgagttagtatactaccactaggacatgagttagtatactaccactaggacatgagttagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735487 True 1491 lncRNA 0.41 2 10482447 10484731

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 113869 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 333318 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 348319 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 360637 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 589212 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 371638 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 459672 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 476013 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 477054 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 489097 10973828 ~ 10979399 (+)
G1516209 NA non-coding upstream 26086 10455617 ~ 10456361 (+)
G1516207 NA non-coding upstream 31124 10451029 ~ 10451323 (+)
G1516206 NA non-coding upstream 32662 10449583 ~ 10449785 (+)
G1516202 NA non-coding upstream 37179 10445067 ~ 10445268 (+)
G1516198 NA non-coding upstream 40778 10441446 ~ 10441669 (+)
G1516226 NA non-coding downstream 20541 10505272 ~ 10506175 (+)
G1516288 NA non-coding downstream 44494 10529225 ~ 10529505 (+)
G1516292 NA non-coding downstream 49645 10534376 ~ 10534636 (+)
G1516297 NA non-coding downstream 53542 10538273 ~ 10540127 (+)
G1516306 NA non-coding downstream 61043 10545774 ~ 10546036 (+)
G1516136 NA other upstream 155309 10310107 ~ 10327138 (+)
G1515853 NA other upstream 310491 10170102 ~ 10171956 (+)
G1515776 NA other upstream 507141 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1479321 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1802237 8677497 ~ 8682383 (+)
G1516637 NA other downstream 532034 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 601354 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1148336 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1158058 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1455331 11940062 ~ 11941897 (+)

Expression


Co-expression Network