Gene
RNA
| Item | Value |
|---|---|
| gene id | G1516226 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 10505272 ~ 10506175 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1735495 | True | 240 | lncRNA | 0.33 | 2 | 10505272 | 10506175 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941089 | LOC106574813 | coding | upstream | 136694 | 10362570 ~ 10368578 (+) |
| LOC118941088 | LOC106575836 | coding | upstream | 356143 | 10146949 ~ 10149129 (+) |
| LOC110495585 | LOC106574888 | coding | upstream | 371144 | 10131530 ~ 10134128 (+) |
| LOC118941061 | NA | coding | upstream | 383462 | 10118660 ~ 10121810 (+) |
| LOC110495584 | LOC106574807 | coding | upstream | 612037 | 9887375 ~ 9893235 (+) |
| LOC118941090 | LOC106575811 | coding | downstream | 350194 | 10856369 ~ 10862119 (+) |
| LOC110527277 | LOC106575822 | coding | downstream | 438228 | 10944403 ~ 10956829 (+) |
| LOC118936256 | LOC100194643 | coding | downstream | 454569 | 10960744 ~ 10967479 (+) |
| LOC118941091 | NA | coding | downstream | 455610 | 10961785 ~ 10965666 (+) |
| LOC110527282 | acadl | coding | downstream | 467653 | 10973828 ~ 10979399 (+) |
| G1516219 | NA | non-coding | upstream | 20541 | 10482447 ~ 10484731 (+) |
| G1516209 | NA | non-coding | upstream | 48911 | 10455617 ~ 10456361 (+) |
| G1516207 | NA | non-coding | upstream | 53949 | 10451029 ~ 10451323 (+) |
| G1516206 | NA | non-coding | upstream | 55487 | 10449583 ~ 10449785 (+) |
| G1516202 | NA | non-coding | upstream | 60004 | 10445067 ~ 10445268 (+) |
| G1516288 | NA | non-coding | downstream | 23050 | 10529225 ~ 10529505 (+) |
| G1516292 | NA | non-coding | downstream | 28201 | 10534376 ~ 10534636 (+) |
| G1516297 | NA | non-coding | downstream | 32098 | 10538273 ~ 10540127 (+) |
| G1516306 | NA | non-coding | downstream | 39599 | 10545774 ~ 10546036 (+) |
| G1516308 | NA | non-coding | downstream | 43798 | 10549973 ~ 10550224 (+) |
| G1516136 | NA | other | upstream | 178134 | 10310107 ~ 10327138 (+) |
| G1515853 | NA | other | upstream | 333316 | 10170102 ~ 10171956 (+) |
| G1515776 | NA | other | upstream | 529966 | 9974528 ~ 9975306 (+) |
| G1515005 | cbs | other | upstream | 1502146 | 9000398 ~ 9003126 (+) |
| LOC110495395 | LOC106574852 | other | upstream | 1825062 | 8677497 ~ 8682383 (+) |
| G1516637 | NA | other | downstream | 510590 | 11016765 ~ 11017089 (+) |
| LOC118941092 | LOC106575823 | other | downstream | 579910 | 10978682 ~ 11092554 (+) |
| G1517015 | NA | other | downstream | 1126892 | 11633067 ~ 11634979 (+) |
| G1517019 | NA | other | downstream | 1136614 | 11642789 ~ 11643758 (+) |
| G1517150 | NA | other | downstream | 1433887 | 11940062 ~ 11941897 (+) |
