G1516401


Basic Information

Item Value
gene id G1516401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10669992 ~ 10670235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735725
GACGAGGCTAGCGCTTGTAGTCTTACCAACGAGGCTAGCTCTTGTAGTCTTACCGACGAGGCTAGCGCTTGTAGTCTTACCGACAAGGCTAGATCTTGTAGTCTTACCGACGAGGCTAGCTCTTGTAGTCTTACCGACGAGGCTAGCTCTTGTAGTCTTACCGACGAGGCTAGCTCTTGTAGTCTTACCGACGAGGCTAGCTCTTGTAGTCTTACCGATGAGGCTAGCTCTTGTAGTCTTACCG

Function

NR:

description
PREDICTED: ATP-dependent RNA helicase DDX24

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735725 True 244 lncRNA 0.51 1 10669992 10670235

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 301414 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 520863 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 535864 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 548182 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 776757 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 186134 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 274168 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 290509 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 291550 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 303593 10973828 ~ 10979399 (+)
G1516397 NA non-coding upstream 7501 10662289 ~ 10662491 (+)
G1516348 NA non-coding upstream 64872 10604887 ~ 10605120 (+)
G1516347 NA non-coding upstream 66943 10602721 ~ 10603049 (+)
G1516342 NA non-coding upstream 75627 10594140 ~ 10594365 (+)
G1516339 NA non-coding upstream 84697 10585068 ~ 10585295 (+)
G1516411 NA non-coding downstream 8042 10678277 ~ 10678545 (+)
G1516416 NA non-coding downstream 11174 10681409 ~ 10681686 (+)
G1516419 NA non-coding downstream 13979 10684214 ~ 10684499 (+)
G1516426 NA non-coding downstream 19160 10689395 ~ 10689624 (+)
G1516430 NA non-coding downstream 22639 10692874 ~ 10693099 (+)
G1516136 NA other upstream 342854 10310107 ~ 10327138 (+)
G1515853 NA other upstream 498036 10170102 ~ 10171956 (+)
G1515776 NA other upstream 694686 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1666866 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1989782 8677497 ~ 8682383 (+)
G1516637 NA other downstream 346530 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 415850 10978682 ~ 11092554 (+)
G1517015 NA other downstream 962832 11633067 ~ 11634979 (+)
G1517019 NA other downstream 972554 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1269827 11940062 ~ 11941897 (+)

Expression


Co-expression Network