G1516416


Basic Information

Item Value
gene id G1516416
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10681409 ~ 10681686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735740
gcctcatcactaacacagactcctctactgctgcctcatcactaacacagactcctctactgctgcctcatcactaacacagactccTCTATGGCTGCctcatcactaacacagactccTCTATGACTGCctcatcactaacacagactccTCTATGGCTGCctcatcactaacacagactccTCTATGACTGCctcatcactaacacagactccTCTATGGCTGCctcatcactaacacagactccTCTATGGCTGCctcatcactaacacagactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735740 True 278 lncRNA 0.49 1 10681409 10681686

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 312831 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 532280 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 547281 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 559599 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 788174 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 174683 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 262717 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 279058 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 280099 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 292142 10973828 ~ 10979399 (+)
G1516411 NA non-coding upstream 2864 10678277 ~ 10678545 (+)
G1516401 NA non-coding upstream 11174 10669992 ~ 10670235 (+)
G1516397 NA non-coding upstream 18918 10662289 ~ 10662491 (+)
G1516348 NA non-coding upstream 76289 10604887 ~ 10605120 (+)
G1516347 NA non-coding upstream 78360 10602721 ~ 10603049 (+)
G1516419 NA non-coding downstream 2528 10684214 ~ 10684499 (+)
G1516426 NA non-coding downstream 7709 10689395 ~ 10689624 (+)
G1516430 NA non-coding downstream 11188 10692874 ~ 10693099 (+)
G1516431 NA non-coding downstream 11418 10693104 ~ 10693325 (+)
G1516432 NA non-coding downstream 12284 10693970 ~ 10694362 (+)
G1516136 NA other upstream 354271 10310107 ~ 10327138 (+)
G1515853 NA other upstream 509453 10170102 ~ 10171956 (+)
G1515776 NA other upstream 706103 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1678283 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2001199 8677497 ~ 8682383 (+)
G1516637 NA other downstream 335079 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 404399 10978682 ~ 11092554 (+)
G1517015 NA other downstream 951381 11633067 ~ 11634979 (+)
G1517019 NA other downstream 961103 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1258376 11940062 ~ 11941897 (+)

Expression


Co-expression Network