G1516419


Basic Information

Item Value
gene id G1516419
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10684214 ~ 10684499 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735743
acagggttatatccctgtatagttataacaggaagagagggacagggttatatccctgtatagttataacaggaagagagggacagggttatgtcagtgtatagttataacaggaagagagggacagggttatgtcagtgtatagttataacaggaagagagggacagggttatgtcagtgtatagttataacaggaagagagggacagggttatgtcagtgtatatttataacaggaagagagggacagggttatgtcagtgtatagttataacaggaagagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735743 True 286 lncRNA 0.41 1 10684214 10684499

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 315636 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 535085 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 550086 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 562404 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 790979 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 171870 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 259904 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 276245 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 277286 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 289329 10973828 ~ 10979399 (+)
G1516416 NA non-coding upstream 2528 10681409 ~ 10681686 (+)
G1516411 NA non-coding upstream 5669 10678277 ~ 10678545 (+)
G1516401 NA non-coding upstream 13979 10669992 ~ 10670235 (+)
G1516397 NA non-coding upstream 21723 10662289 ~ 10662491 (+)
G1516348 NA non-coding upstream 79094 10604887 ~ 10605120 (+)
G1516426 NA non-coding downstream 4896 10689395 ~ 10689624 (+)
G1516430 NA non-coding downstream 8375 10692874 ~ 10693099 (+)
G1516431 NA non-coding downstream 8605 10693104 ~ 10693325 (+)
G1516432 NA non-coding downstream 9471 10693970 ~ 10694362 (+)
G1516433 NA non-coding downstream 10012 10694511 ~ 10695315 (+)
G1516136 NA other upstream 357076 10310107 ~ 10327138 (+)
G1515853 NA other upstream 512258 10170102 ~ 10171956 (+)
G1515776 NA other upstream 708908 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1681088 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2004004 8677497 ~ 8682383 (+)
G1516637 NA other downstream 332266 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 401586 10978682 ~ 11092554 (+)
G1517015 NA other downstream 948568 11633067 ~ 11634979 (+)
G1517019 NA other downstream 958290 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1255563 11940062 ~ 11941897 (+)

Expression


Co-expression Network