G1516426


Basic Information

Item Value
gene id G1516426
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10689395 ~ 10689624 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735750
acacatcaattacactacacATATctttatacacatcaattacactatacacatctttatacacatcaattacactatacacatctttatacacatcaattacactatacatatctatatacacatcaattacactacacATATctttatacacatcaattacactatacatatctcaatacacatcaattacactatacatatctttatacacatcaattacactatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735750 True 230 lncRNA 0.26 1 10689395 10689624

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 320817 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 540266 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 555267 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 567585 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 796160 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 166745 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 254779 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 271120 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 272161 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 284204 10973828 ~ 10979399 (+)
G1516419 NA non-coding upstream 4896 10684214 ~ 10684499 (+)
G1516416 NA non-coding upstream 7709 10681409 ~ 10681686 (+)
G1516411 NA non-coding upstream 10850 10678277 ~ 10678545 (+)
G1516401 NA non-coding upstream 19160 10669992 ~ 10670235 (+)
G1516397 NA non-coding upstream 26904 10662289 ~ 10662491 (+)
G1516430 NA non-coding downstream 3250 10692874 ~ 10693099 (+)
G1516431 NA non-coding downstream 3480 10693104 ~ 10693325 (+)
G1516432 NA non-coding downstream 4346 10693970 ~ 10694362 (+)
G1516433 NA non-coding downstream 4887 10694511 ~ 10695315 (+)
G1516435 NA non-coding downstream 5894 10695518 ~ 10695718 (+)
G1516136 NA other upstream 362257 10310107 ~ 10327138 (+)
G1515853 NA other upstream 517439 10170102 ~ 10171956 (+)
G1515776 NA other upstream 714089 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1686269 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2009185 8677497 ~ 8682383 (+)
G1516637 NA other downstream 327141 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 396461 10978682 ~ 11092554 (+)
G1517015 NA other downstream 943443 11633067 ~ 11634979 (+)
G1517019 NA other downstream 953165 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1250438 11940062 ~ 11941897 (+)

Expression


Co-expression Network