Gene
RNA
| Item | Value |
|---|---|
| gene id | G1516560 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 10844924 ~ 10845365 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1735897 | True | 442 | lncRNA | 0.48 | 1 | 10844924 | 10845365 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527275 | LOC106590732 | coding | downstream | 457851 | 10374771 ~ 10387073 (-) |
| LOC110516308 | LOC105023143 | coding | downstream | 615043 | 10174859 ~ 10229881 (-) |
| LOC110495586 | LOC106574945 | coding | downstream | 686418 | 10149011 ~ 10158506 (-) |
| LOC110497041 | LOC106574885 | coding | downstream | 698079 | 10138344 ~ 10146845 (-) |
| LOC110497040 | LOC106593457 | coding | downstream | 727152 | 10074275 ~ 10117772 (-) |
| LOC118941093 | NA | coding | upstream | 343427 | 11185131 ~ 11194773 (-) |
| LOC110495606 | LOC106575688 | coding | upstream | 350732 | 11196097 ~ 11204430 (-) |
| LOC110527288 | LOC106574778 | coding | upstream | 365954 | 11211319 ~ 11212299 (-) |
| LOC110495607 | LOC106592309 | coding | upstream | 373654 | 11219019 ~ 11272018 (-) |
| LOC110495612 | LOC106574782 | coding | upstream | 429530 | 11274895 ~ 11299017 (-) |
| G1516542 | NA | non-coding | downstream | 58990 | 10785003 ~ 10785934 (-) |
| G1516539 | NA | non-coding | downstream | 67806 | 10776794 ~ 10777118 (-) |
| G1516438 | NA | non-coding | downstream | 142403 | 10702025 ~ 10702521 (-) |
| G1516425 | NA | non-coding | downstream | 156188 | 10688441 ~ 10688736 (-) |
| G1516420 | NA | non-coding | downstream | 159259 | 10685458 ~ 10685665 (-) |
| G1516563 | LOC106575811 | non-coding | upstream | 11270 | 10856635 ~ 10859949 (-) |
| G1516543 | NA | non-coding | upstream | 15781 | 10861146 ~ 10862047 (-) |
| G1516572 | NA | non-coding | upstream | 25414 | 10870779 ~ 10872043 (-) |
| G1516575 | NA | non-coding | upstream | 40870 | 10886235 ~ 10886473 (-) |
| G1516576 | NA | non-coding | upstream | 42945 | 10888310 ~ 10888560 (-) |
| G1516107 | NA | other | downstream | 584932 | 10258825 ~ 10260556 (-) |
| G1516062 | LOC107575789 | other | downstream | 634091 | 10210318 ~ 10210833 (-) |
| G1515880 | LOC102777708 | other | downstream | 1079699 | 9761473 ~ 9765225 (-) |
| LOC110495556 | LOC106574923 | other | downstream | 1351042 | 9486842 ~ 9501240 (-) |
| G1516562 | LOC106575810 | other | upstream | 8204 | 10853569 ~ 10856314 (-) |
| G1516757 | NA | other | upstream | 203040 | 11048405 ~ 11048928 (-) |
| G1516771 | LOC106575823 | other | upstream | 243864 | 11089229 ~ 11092444 (-) |
| G1516784 | unc80 | other | upstream | 322256 | 11167621 ~ 11174483 (-) |
| LOC110528752 | agap1 | other | upstream | 763671 | 11463472 ~ 11746107 (-) |
