Gene
RNA
| Item | Value |
|---|---|
| gene id | G1516741 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 11012930 ~ 11013144 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/threonine-protein phosphatase CPPED1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1736123 | True | 215 | lncRNA | 0.45 | 1 | 11012930 | 11013144 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527275 | LOC106590732 | coding | downstream | 625857 | 10374771 ~ 10387073 (-) |
| LOC110516308 | LOC105023143 | coding | downstream | 783049 | 10174859 ~ 10229881 (-) |
| LOC110495586 | LOC106574945 | coding | downstream | 854424 | 10149011 ~ 10158506 (-) |
| LOC110497041 | LOC106574885 | coding | downstream | 866085 | 10138344 ~ 10146845 (-) |
| LOC110497040 | LOC106593457 | coding | downstream | 895158 | 10074275 ~ 10117772 (-) |
| LOC118941093 | NA | coding | upstream | 175648 | 11185131 ~ 11194773 (-) |
| LOC110495606 | LOC106575688 | coding | upstream | 182953 | 11196097 ~ 11204430 (-) |
| LOC110527288 | LOC106574778 | coding | upstream | 198175 | 11211319 ~ 11212299 (-) |
| LOC110495607 | LOC106592309 | coding | upstream | 205875 | 11219019 ~ 11272018 (-) |
| LOC110495612 | LOC106574782 | coding | upstream | 261751 | 11274895 ~ 11299017 (-) |
| G1516738 | NA | non-coding | downstream | 11221 | 11000882 ~ 11001709 (-) |
| G1516735 | NA | non-coding | downstream | 24834 | 10986322 ~ 10988096 (-) |
| G1516727 | LOC100194643 | non-coding | downstream | 45395 | 10959318 ~ 10967535 (-) |
| G1516728 | LOC106575822 | non-coding | downstream | 55933 | 10944415 ~ 10956997 (-) |
| G1516723 | NA | non-coding | downstream | 72215 | 10940153 ~ 10940715 (-) |
| G1516742 | NA | non-coding | upstream | 587 | 11013731 ~ 11014268 (-) |
| G1516743 | NA | non-coding | upstream | 1703 | 11014847 ~ 11015114 (-) |
| G1516744 | NA | non-coding | upstream | 3073 | 11016217 ~ 11016449 (-) |
| G1516745 | NA | non-coding | upstream | 9179 | 11022323 ~ 11022674 (-) |
| G1516768 | NA | non-coding | upstream | 65903 | 11079047 ~ 11079286 (-) |
| G1516562 | LOC106575810 | other | downstream | 156616 | 10853569 ~ 10856314 (-) |
| G1516107 | NA | other | downstream | 752938 | 10258825 ~ 10260556 (-) |
| G1516062 | LOC107575789 | other | downstream | 802097 | 10210318 ~ 10210833 (-) |
| G1515880 | LOC102777708 | other | downstream | 1247705 | 9761473 ~ 9765225 (-) |
| G1516757 | NA | other | upstream | 35261 | 11048405 ~ 11048928 (-) |
| G1516771 | LOC106575823 | other | upstream | 76085 | 11089229 ~ 11092444 (-) |
| G1516784 | unc80 | other | upstream | 154477 | 11167621 ~ 11174483 (-) |
| LOC110528752 | agap1 | other | upstream | 595892 | 11463472 ~ 11746107 (-) |
| LOC110527304 | LOC106575687 | other | upstream | 925986 | 11926474 ~ 11972660 (-) |
