G1516784 (unc80)


Basic Information

Item Value
gene id G1516784
gene name unc80
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11167621 ~ 11174483 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736174
tgtagggttgtgtgtgtgcgtaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttacctgtggcTGGGCAGCATGGTGCTGCGGGTGCTGGGTTCAGGCTGGGCGCTGCCCGTGGCGTGACTAGAGAAGCGTCGCTGGGTGATGAGCCTGGGCAGGAAGACCTCATGTTCACTCACCACACTGGGAATACTGATAGAGTcatctagaggagagagaggaggggagggagagacagagagagaggtaggggaggaggtagggccagagagagagagggaggaaaggaggtcaggacagagagagagggaggaaaggaggtaaggacagagagagagggaggggaaaggaggtagggacagagagtgaGGAAAGGGGGTGATCAAAAGACCAGTGTGGGGTGAGTGGGGGTTGAAAATGACATGCAGGCAAACCCAAACATGCAACCAGACACCattcagagtgaaagagggagaaagagagaaagagagggagagaaaaacagacaATATGAAAGCGGAGATACAATTCATTCAAGGCCCAGTGCTGTCAAAAACGTGACTTTTCTTTGGTTTATATACAccgaactaaaatataaacgcaacatgtaaagtgttggtcccatgtttcatgtagatgaaataaaatatcccagaaatgttccatactcaaaaaaagctaatttctctcaaatttgtttacatccctgttagtgaacatttctcctttgccaagataatccacccacctgacaggtgtggcatatcaagaagctgattaaacagcatgggcattacacaggtgcaccttgtgctggagaccactctaaaatgtgcagttttgtcacacaacacaatgccacagatgtttcaagttttgagggtggGGGCTGGCatgcagactgcaggaatgtcgaccagagctgttgccagagaattgaatgttaatttctctaccataagcctggctagtgatagtagtaggagggatatctgactcagtgatagagtgatagtggtagtgatagtagtaggaggGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGGGGTATCTGACTCAGTGATAGTAGTAAGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGGTGTCTGACTCAGTGATAGTAGTAGGAGGGGTGTCTGACTCAGTGATAGTAGTAGGAGGGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGgtgtctgactcagtgatagtagtaggaggggtgtctgactcagtgatagtagtaggaggggtgtctgactcagtgatagagtgatagtggtagtgatagtagtagtagtagtgatagtcgtagtgatagtagtaggtaggaggggtatctgactcagtgatagagtgatagtggtagtgatagtagtagtagtagtgatagtcgtagtgatagtagtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtgtctgactcagtgatagtagtagtagtagtgatagtagtaggagtggtgtctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagtgatagtagtagtagtagtgatagtagtaggagtggtgtctgactcagtgatagagtgatagtggtagtgatagcagtaggaggggtatctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtgtctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtgtctgactcagtgatagtagtagtagtagtgatagtagtaggagtggtgtctgactcagtgatagagtgatagtggtagtgatagtaGTAGGAGGGGTGACTGActcagtgatagtagtagtagtagtaggtaggaggggtatctgactcagtgatagagtggtagtggtagtgatagtagtagtaggaggggtgtctgactcagtgatagagttatagtggtagtgatagtagtagtaggagtggtgtctgactcagtgatagagtgatagtaGTAGGTAGGAGGGGCATCTGActcagtgatagtagtagtaggagtggtgtctgactcagtgatagagtgatagtagtaggtaggaggggtatctgactcagtgatagtagtagtaggaggggtatctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtagtagtgatagtagtaggaggggtgtctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtgtctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagtgatagtagtagtaggagtggtatctgactcagtgatagagtgatagtagtagtgatagtagtaggaggGGTGTCTGACTCTCTTCCTGCTCCTGTTCGTCATCCTCGTCGGTGCGGCTTAGCGTGTCCTGAGAGGGCTGGCGTGACGGCTGGCTCTCCTGCTCCCACACCGTGCCCGTGCCCGTGTTGGACCGGGACATGGTGGCCAGCGACAGGCGGTAGGCAGAGGTGGACGTGCCCACTGTGCTGATGGACGTCTTGCCCTGGTACGCTGTGGGCAGGAGGGGGCATGAACAGACATCTCTTATCATAACCTGTCATTTAATAACGAAAGGTTAACATGGCATTTGGGTAGAGTGCTAATGGGTAGTGTACTAATGGGTAGTGCACTAATGGGTAGTGTACTAATGGGTAGTGTACTaatgggtagtgtactactggGTAGTAACTaatgggtagtgtactactggGTAGTAACTCATGGGTAGTAACAAATGGGTAGTGCCTAATGGGTAGTGAACTAATGGGTAGTGAACTAATGGGTAGTAACTAATGGGTAGTGTACTAATGGGTAGTAACTAATGGGTAGTAACTAATGGGTAGTAACTAATGGGTAGTGAACGAATGGGTAGTGTACTAATGGGTAGTAACTAATGGGTAGTGTGCTAATGGGTAGTCCACTAACGGGTAGTGTACTAAATGGGTAGTAACTAATGGGTAGTAACTAATGGGTAGTGTACTAATGGGTAGTAACTAATGGGTAGTGTACTAATGGTAGTGTACTAATGGGTAGTGCACTAAAAAGTAGTATACTAACGGCTACTCTACTAATAACTAGTATACTAATCAGTGGGTTACCAACCAGAGCCACTGTGCACGGCCTCCTTGAGGATCTTCAGCTCGTTGTTGAACTCTGCGAACAGGGAGCTCTTGCAGAGGGGGCGGGGGATGAAGCGACGCTCCAGCTGGTCAGCGATGTGGTGGCGGGCCGTGATCTCCTCCTGGGAGTCAGCTGGCTGGGTCAGGAGCTGGGAGGGGTTAAAGAGGAAGGGATGAAGGGAACGGGAGAAGAAGAGAGCACGAaaagcgagagagcaagagagagagagacaaggcaagaagggcattctatgccttcaaaaggaacataaaattcaacataataattaggatctggctaaaaatacttgaatcagttatagaacccaatgccctttatggttgtgaggtctggtgtccgctcaccaaccaagaattcacaaaatgggacaaacaccaaattgagactctgcatgcagaattctgcaaaaatatcctccttgtacaacatagaacaccaaat
>TU1736171
tgtagggttgtgtgtgtgcgtaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttacctgtggcTGGGCAGCATGGTGCTGCGGGTGCTGGGTTCAGGCTGGGCGCTGCCCGTGGCGTGACTAGAGAAGCGTCGCTGGGTGATGAGCCTGGGCAGGAAGACCTCATGTTCACTCACCACACTGGGAATACTGATAGAGTcatctagaggagagagaggaggggagggagagacagagagagaggtaggggaggaggtagggccagagagagagagggaggaaaggaggtcaggacagagagagagggaggaaaggaggtaaggacagagagagagggaggggaaaggaggtagggacagagagtgaGGAAAGGGGGTGATCAAAAGACCAGTGTGGGGTGAGTGGGGGTTGAAAATGACATGCAGGCAAACCCAAACATGCAACCAGACACCattcagagtgaaagagggagaaagagagaaagagagggagagaaaaacagacaATATGAAAGCGGAGATACAATTCATTCAAGGCCCAGTGCTGTCAAAAACGTGACTTTTCTTTGGTTTATATACAccgaactaaaatataaacgcaacatgtaaagtgttggtcccatgtttcatgtagatgaaataaaatatcccagaaatgttccatactcaaaaaaagctaatttctctcaaatttgtttacatccctgttagtgaacatttctcctttgccaagataatccacccacctgacaggtgtggcatatcaagaagctgattaaacagcatgggcattacacaggtgcaccttgtgctggagaccactctaaaatgtgcagttttgtcacacaacacaatgccacagatgtttcaagttttgagggtggGGGCTGGCatgcagactgcaggaatgtcgaccagagctgttgccagagaattgaatgttaatttctctaccataagcctggctagtgatagtagtaggagggatatctgactcagtgatagagtgatagtggtagtgatagtagtaggaggGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGGGGTATCTGACTCAGTGATAGTAGTAAGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGGTGTCTGACTCAGTGATAGTAGTAGGAGGGGTGTCTGACTCAGTGATAGTAGTAGGAGGGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGTGGTGTCTGACTCAGTGATAGTAGTAGGAGgtgtctgactcagtgatagtagtaggaggggtgtctgactcagtgatagtagtaggaggggtgtctgactcagtgatagagtgatagtggtagtgatagtagtagtagtagtgatagtcgtagtgatagtagtaggtaggaggggtatctgactcagtgatagagtgatagtggtagtgatagtagtagtagtagtgatagtcgtagtgatagtagtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtgtctgactcagtgatagtagtagtagtagtgatagtagtaggagtggtgtctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagtgatagtagtagtagtagtgatagtagtaggagtggtgtctgactcagtgatagagtgatagtggtagtgatagcagtaggaggggtatctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtgtctgactcagtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcggtgatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtatctgactcagagatagagtgatagtggtagtgatagtagtaggaggggtgtctgactcagtgatagtagtagtagtagtgatagtagtaggagtggtgtctgactcagtgatagagtgatagtggtagtgatagtaGTAGGAGGGGTGACTGActcagtgatagtagtagtagtagtaggtaggaggggtatctgactcagtgatagagtggtagtggtagtgatagtagtagtaggaggggtgtctgactcagtgatagagttatagtggtagtgatagtagtagtaggagtggtgtctgactcagtgatagagtgatagtaGTAGGTAGGAGGGGCATCTGACTCAGTGATAGTAGGAGGGGTATCTG

Function

symbol description
unc80 Predicted to enable cation channel activity. Predicted to be involved in cation homeostasis. Predicted to be part of cation channel complex. Predicted to be active in axon.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736174 False 4748 TUCP 0.46 9 11167621 11174483
TU1736171 True 3119 lncRNA 0.46 6 11169749 11174483

Neighbor

gene id symbol gene type direction distance location
LOC110527275 LOC106590732 coding downstream 782676 10374771 ~ 10387073 (-)
LOC110516308 LOC105023143 coding downstream 939868 10174859 ~ 10229881 (-)
LOC110495586 LOC106574945 coding downstream 1011243 10149011 ~ 10158506 (-)
LOC110497041 LOC106574885 coding downstream 1022904 10138344 ~ 10146845 (-)
LOC110497040 LOC106593457 coding downstream 1051977 10074275 ~ 10117772 (-)
LOC118941093 NA coding upstream 14309 11185131 ~ 11194773 (-)
LOC110495606 LOC106575688 coding upstream 21614 11196097 ~ 11204430 (-)
LOC110527288 LOC106574778 coding upstream 36836 11211319 ~ 11212299 (-)
LOC110495607 LOC106592309 coding upstream 44536 11219019 ~ 11272018 (-)
LOC110495612 LOC106574782 coding upstream 100412 11274895 ~ 11299017 (-)
G1516797 NA non-coding downstream 32285 11135893 ~ 11137464 (-)
G1516769 NA non-coding downstream 89139 11080396 ~ 11080610 (-)
G1516768 NA non-coding downstream 90463 11079047 ~ 11079286 (-)
G1516745 NA non-coding downstream 147075 11022323 ~ 11022674 (-)
G1516744 NA non-coding downstream 153300 11016217 ~ 11016449 (-)
G1516829 NA non-coding upstream 38181 11212664 ~ 11213034 (-)
G1516832 NA non-coding upstream 42712 11217195 ~ 11217420 (-)
G1516833 NA non-coding upstream 64452 11238935 ~ 11239597 (-)
G1516857 NA non-coding upstream 129332 11303815 ~ 11304102 (-)
G1516771 LOC106575823 other downstream 77305 11089229 ~ 11092444 (-)
G1516757 NA other downstream 120821 11048405 ~ 11048928 (-)
G1516562 LOC106575810 other downstream 313435 10853569 ~ 10856314 (-)
G1516107 NA other downstream 909757 10258825 ~ 10260556 (-)
G1516062 LOC107575789 other downstream 958916 10210318 ~ 10210833 (-)
LOC110528752 agap1 other upstream 434553 11463472 ~ 11746107 (-)
LOC110527304 LOC106575687 other upstream 764647 11926474 ~ 11972660 (-)
G1517784 NA other upstream 773082 11947565 ~ 11948345 (-)
G1517822 LOC106575686 other upstream 846289 12020772 ~ 12023228 (-)
LOC110512633 LOC106575771 other upstream 1065751 12240234 ~ 12245743 (-)

Expression


Co-expression Network