G1516887


Basic Information

Item Value
gene id G1516887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11326219 ~ 11327380 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736324
ctacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctacacctgttgtattcagcatttcactgttaggtctacacctgttgtattcagcatttcactgttaggtctacacctgttgtattcggcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcggcatttcactgttaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattaagcatttcactgttaggtctacatctgttgtattcagcatttcactgttaggtctacacctgttgtattcatgtgacaaataacatttgatttgatttgact
>TU1736327
ctacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgtaaggtctacctacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgttaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattaagcatttcactgttaggtctacatctgttgtattcagcatttcactgttaggtctacacctgttgtattcatgtgacaaataacatttgatttgatttgact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736324 False 528 lncRNA 0.39 2 11326219 11327380
TU1736327 True 649 lncRNA 0.39 3 11326219 11327380

Neighbor

gene id symbol gene type direction distance location
LOC100505417 LOC100505417 coding downstream 19182 11305247 ~ 11307037 (-)
LOC110495612 LOC106574782 coding downstream 27202 11274895 ~ 11299017 (-)
LOC110495607 LOC106592309 coding downstream 54201 11219019 ~ 11272018 (-)
LOC110527288 LOC106574778 coding downstream 113920 11211319 ~ 11212299 (-)
LOC110495606 LOC106575688 coding downstream 121789 11196097 ~ 11204430 (-)
LOC118941094 ackr3 coding upstream 28297 11355677 ~ 11363249 (-)
LOC110528752 agap1 coding upstream 136092 11463472 ~ 11746107 (-)
trnaa-ugc-134 NA coding upstream 242275 11569655 ~ 11569726 (-)
LOC110495629 LOC106574809 coding upstream 419281 11746661 ~ 11748608 (-)
LOC110497052 LOC106574838 coding upstream 453559 11780939 ~ 11791230 (-)
G1516857 NA non-coding downstream 22117 11303815 ~ 11304102 (-)
G1516833 NA non-coding downstream 86622 11238935 ~ 11239597 (-)
G1516832 NA non-coding downstream 108799 11217195 ~ 11217420 (-)
G1516829 NA non-coding downstream 113185 11212664 ~ 11213034 (-)
LOC118941093 NA non-coding downstream 136941 11185131 ~ 11194773 (-)
G1516897 NA non-coding upstream 12228 11339608 ~ 11339920 (-)
G1516898 NA non-coding upstream 12654 11340034 ~ 11340247 (-)
G1516902 NA non-coding upstream 15437 11342817 ~ 11343050 (-)
G1516909 NA non-coding upstream 23184 11350564 ~ 11351093 (-)
G1517553 NA non-coding upstream 26050 11353430 ~ 11354423 (-)
G1516784 unc80 other downstream 151736 11167621 ~ 11174483 (-)
G1516771 LOC106575823 other downstream 233775 11089229 ~ 11092444 (-)
G1516757 NA other downstream 277291 11048405 ~ 11048928 (-)
G1516562 LOC106575810 other downstream 469905 10853569 ~ 10856314 (-)
G1516107 NA other downstream 1066227 10258825 ~ 10260556 (-)
LOC110527304 LOC106575687 other upstream 611750 11926474 ~ 11972660 (-)
G1517784 NA other upstream 620185 11947565 ~ 11948345 (-)
G1517822 LOC106575686 other upstream 693392 12020772 ~ 12023228 (-)
LOC110512633 LOC106575771 other upstream 912854 12240234 ~ 12245743 (-)

Expression


Co-expression Network