Gene
RNA
| Item | Value |
|---|---|
| gene id | G1517617 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 11523862 ~ 11524097 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1737239 | True | 214 | lncRNA | 0.40 | 2 | 11523862 | 11524097 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941094 | ackr3 | coding | downstream | 160613 | 11355677 ~ 11363249 (-) |
| LOC100505417 | LOC100505417 | coding | downstream | 216825 | 11305247 ~ 11307037 (-) |
| LOC110495612 | LOC106574782 | coding | downstream | 224845 | 11274895 ~ 11299017 (-) |
| LOC110495607 | LOC106592309 | coding | downstream | 251844 | 11219019 ~ 11272018 (-) |
| LOC110527288 | LOC106574778 | coding | downstream | 311563 | 11211319 ~ 11212299 (-) |
| trnaa-ugc-134 | NA | coding | upstream | 45558 | 11569655 ~ 11569726 (-) |
| LOC110495629 | LOC106574809 | coding | upstream | 222564 | 11746661 ~ 11748608 (-) |
| LOC110497052 | LOC106574838 | coding | upstream | 256842 | 11780939 ~ 11791230 (-) |
| LOC110495626 | NA | coding | upstream | 290193 | 11814290 ~ 11817266 (-) |
| LOC110519912 | rgn | coding | upstream | 293247 | 11817344 ~ 11822607 (-) |
| G1517586 | NA | non-coding | downstream | 100036 | 11423483 ~ 11423826 (-) |
| G1517553 | NA | non-coding | downstream | 169439 | 11353430 ~ 11354423 (-) |
| G1516909 | NA | non-coding | downstream | 172769 | 11350564 ~ 11351093 (-) |
| G1516902 | NA | non-coding | downstream | 180812 | 11342817 ~ 11343050 (-) |
| G1516898 | NA | non-coding | downstream | 183615 | 11340034 ~ 11340247 (-) |
| G1517629 | NA | non-coding | upstream | 18092 | 11542189 ~ 11543135 (-) |
| G1517648 | NA | non-coding | upstream | 57317 | 11581414 ~ 11582815 (-) |
| G1517654 | NA | non-coding | upstream | 67695 | 11591792 ~ 11592360 (-) |
| G1517660 | NA | non-coding | upstream | 79319 | 11603416 ~ 11603680 (-) |
| G1517662 | NA | non-coding | upstream | 81825 | 11605922 ~ 11606447 (-) |
| G1516784 | unc80 | other | downstream | 349379 | 11167621 ~ 11174483 (-) |
| G1516771 | LOC106575823 | other | downstream | 431418 | 11089229 ~ 11092444 (-) |
| G1516757 | NA | other | downstream | 474934 | 11048405 ~ 11048928 (-) |
| G1516562 | LOC106575810 | other | downstream | 667548 | 10853569 ~ 10856314 (-) |
| G1516107 | NA | other | downstream | 1263870 | 10258825 ~ 10260556 (-) |
| LOC110528752 | agap1 | other | upstream | 84939 | 11463472 ~ 11746107 (-) |
| LOC110527304 | LOC106575687 | other | upstream | 415033 | 11926474 ~ 11972660 (-) |
| G1517784 | NA | other | upstream | 423468 | 11947565 ~ 11948345 (-) |
| G1517822 | LOC106575686 | other | upstream | 496675 | 12020772 ~ 12023228 (-) |
| LOC110512633 | LOC106575771 | other | upstream | 716137 | 12240234 ~ 12245743 (-) |
