Gene
RNA
| Item | Value |
|---|---|
| gene id | G1517889 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 12227855 ~ 12228657 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: IQ calmodulin-binding motif-containing protein 1-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1737625 | True | 503 | lncRNA | 0.52 | 2 | 12227855 | 12228657 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527242 | LOC106593029 | coding | downstream | 46784 | 12179066 ~ 12181071 (-) |
| LOC110539058 | LOC106575691 | coding | downstream | 135710 | 12086108 ~ 12092145 (-) |
| LOC118941098 | LOC106574821 | coding | downstream | 142271 | 12082853 ~ 12085584 (-) |
| LOC110538825 | eef1b2 | coding | downstream | 159128 | 12065999 ~ 12068727 (-) |
| LOC110518257 | LOC106575719 | coding | downstream | 162218 | 12060272 ~ 12065637 (-) |
| LOC118941032 | LOC106575777 | coding | upstream | 1614 | 12230271 ~ 12237346 (-) |
| LOC110512633 | LOC106575771 | coding | upstream | 12891 | 12240234 ~ 12245743 (-) |
| LOC118941062 | NA | coding | upstream | 17222 | 12245879 ~ 12250456 (-) |
| LOC118936562 | LOC106594175 | coding | upstream | 21699 | 12250356 ~ 12252549 (-) |
| LOC110495544 | LOC106575695 | coding | upstream | 32120 | 12260777 ~ 12272188 (-) |
| G1517885 | NA | non-coding | downstream | 6664 | 12220854 ~ 12221191 (-) |
| G1517842 | NA | non-coding | downstream | 66629 | 12105565 ~ 12161226 (-) |
| G1517867 | LOC106575792 | non-coding | downstream | 71550 | 12155632 ~ 12156305 (-) |
| G1517848 | NA | non-coding | downstream | 114761 | 12112465 ~ 12113094 (-) |
| G1517840 | NA | non-coding | downstream | 138946 | 12088682 ~ 12088909 (-) |
| G1517899 | eed | non-coding | upstream | 46557 | 12275214 ~ 12278588 (-) |
| G1517905 | NA | non-coding | upstream | 65855 | 12294512 ~ 12294796 (-) |
| G1517907 | NA | non-coding | upstream | 68652 | 12297309 ~ 12297775 (-) |
| G1517918 | NA | non-coding | upstream | 80402 | 12309059 ~ 12309613 (-) |
| G1517919 | NA | non-coding | upstream | 81296 | 12309953 ~ 12310249 (-) |
| G1517822 | LOC106575686 | other | downstream | 205415 | 12020772 ~ 12023228 (-) |
| LOC110527304 | LOC106575687 | other | downstream | 255535 | 11926474 ~ 11972660 (-) |
| G1517784 | NA | other | downstream | 279510 | 11947565 ~ 11948345 (-) |
| LOC110528752 | agap1 | other | downstream | 481942 | 11463472 ~ 11746107 (-) |
| G1516784 | unc80 | other | downstream | 1053372 | 11167621 ~ 11174483 (-) |
| G1517902 | NA | other | upstream | 56421 | 12285078 ~ 12285632 (-) |
| G1518019 | LOC106575703 | other | upstream | 355071 | 12583728 ~ 12600331 (-) |
| LOC110495512 | LOC106574713 | other | upstream | 677554 | 12898791 ~ 12910954 (-) |
