G1517935


Basic Information

Item Value
gene id G1517935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12359370 ~ 12360832 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737680
TTTGGTTATTCATTGTCGAGCTTAAAAAAAACGAAGCCAGACTGCAAAATGTTTGGAGCCTAGCTAGAACTGTGTTATTTGTCTGTACACCTCTGCTGCTCACAGTAAACGGAACGAAAGCAATGCAATTGATGTTGAATTTACAGATGTGAGCGCATCAGGCTGTGATTTCATAAAGTAGATGACTCAACTGTTTATTCATTTATACTCGCTTGTGTGTCCTATTGTCCTTTATAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTGGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTAAACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTTGTAACGTTCAGTAAACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTTGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTTGTAACGTTCAGTAAACCAACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTTGTAACGTTCAGTATATCCACTTCTGAATCCTTTAGTAGTAACGTTCAGTATACCCACTTCTGAATCCTTTAGTAGTAACTTCTGAATCCTTTAGTAGTAACGTTCAGTAAACCAACTTCTGAATCCTTTAGTAGTAACGTTCAGTAAACCCACTTCTGAATCCTTTGTTATAACTTTTTGCCGGTCAAGATGACATTTCCTGTAGGCTACAGCAATGACTCGTTGGAACCCAAACTTGGCATTTAACCTACAACACGTTTAAACTTTCGGTCCGGTAGAAGACTTGGTCAGTGCCATTAGTGATGTTACAGCGCACTGTCTGGCTGTGGGTCCGTGTGACTTATAGTGCAGCGCACTGGCTGGCTGTTGGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737680 True 1167 lncRNA 0.40 2 12359370 12360832

Neighbor

gene id symbol gene type direction distance location
LOC110497022 LOC106574871 coding downstream 17040 12330934 ~ 12342330 (-)
ck073 ck073 coding downstream 71268 12281631 ~ 12288102 (-)
LOC110495544 LOC106575695 coding downstream 87182 12260777 ~ 12272188 (-)
LOC118936562 LOC106594175 coding downstream 106821 12250356 ~ 12252549 (-)
LOC118941062 NA coding downstream 108914 12245879 ~ 12250456 (-)
LOC110528732 LOC105019714 coding upstream 109252 12470084 ~ 12506726 (-)
LOC110527216 nud15 coding upstream 191836 12552668 ~ 12553871 (-)
LOC118941039 NA coding upstream 210890 12571503 ~ 12583644 (-)
LOC110495529 LOC106575665 coding upstream 251182 12612014 ~ 12616159 (-)
LOC118941036 NA coding upstream 305014 12665846 ~ 12677668 (-)
G1517933 NA non-coding downstream 13338 12345806 ~ 12346032 (-)
G1517924 NA non-coding downstream 40641 12316417 ~ 12318729 (-)
G1517919 NA non-coding downstream 49121 12309953 ~ 12310249 (-)
G1517918 NA non-coding downstream 49757 12309059 ~ 12309613 (-)
G1517907 NA non-coding downstream 61595 12297309 ~ 12297775 (-)
G1517948 tuba8l2 non-coding upstream 34986 12395818 ~ 12402098 (-)
G1517951 NA non-coding upstream 43756 12404588 ~ 12405881 (-)
G1517955 NA non-coding upstream 52800 12413632 ~ 12415091 (-)
G1517963 NA non-coding upstream 72882 12433714 ~ 12433935 (-)
G1517965 NA non-coding upstream 74774 12435606 ~ 12435967 (-)
G1517902 NA other downstream 73738 12285078 ~ 12285632 (-)
LOC110512633 LOC106575771 other downstream 113627 12240234 ~ 12245743 (-)
G1517822 LOC106575686 other downstream 336930 12020772 ~ 12023228 (-)
G1517784 NA other downstream 411025 11947565 ~ 11948345 (-)
G1518019 LOC106575703 other upstream 222896 12583728 ~ 12600331 (-)
LOC110495512 LOC106574713 other upstream 545379 12898791 ~ 12910954 (-)
LOC110513917 LOC106575727 other upstream 610821 12933662 ~ 13031321 (-)
bcor LOC106574692 other upstream 1023924 13312628 ~ 13402659 (-)
G1518858 LOC106574768 other upstream 1378619 13739451 ~ 13741567 (-)

Expression


Co-expression Network