G1518044


Basic Information

Item Value
gene id G1518044
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12651639 ~ 12653753 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737817
CTGTCTCATATGTTTTATATGGAAGCTGTGACAAATGTCCCACATTTCCAACATGTCAGAAAGAGGGGAAGCTTTGTATCCACCAACATTTTTCAAACTGTTTAAAAAGGAAATGAAAACCCTCTCTTTTAACAGACTTTAAAACTTAGCATGGTAATTAAAATAACTTAAAAAGCATCTCTCGCCAATATTGGCCATGAATGTTGTGAGTTGTTCgacaaataaaacaaaatgtgtTCAGGCTTGCAATGGCATAGAAACGTAAAGTCATGGTCTTCTGATGCCACTGGCATCGACTTGACACAGCAGTCATGAAAATGACTTTTCACCAAAAAAATCCCTTTACTGCCAGTCTTAATAACTGATTGTAACCCTTAAATAATAATCTCTAATGGAGCGATGATAAGGCTTAAACACTGTGCTGGATTCCAATAAGTAACTCTAATGTAATGCCAAAACAGCAGTACTAAATAATGAACAGAATATTATTTCTCAGATGGTTCCTGATTGCACTTAGGTCCGTCACTGCTATCAAAAACATTACCGAGGatgtatttgaaaaaaaaaacagctgcattTAACCATAATATGTCAGTCTGATAAGGATTCTTCTTTTATGATTCTTCTACTAATATCGTTTTGTTGATAAGTTTGCCAAGTCGTCATAAAAACAGACTAATTCTGAGGACATCATTTGCTTAGAAATCCAATGTGTACATTATAATAGGAATTTGGTGAAATTCAAAACAGGGGAAAATGCGTTCATCTTCTTCTCAGTCTATCAGTGGGTGGAGACCGCGCTGGCATCCCCTTCAGCCGGTGCTGCTGTCCGATTGGTTGGGCCAGGGCTCCGAGCTTCGTCTACTGAAGGTGGGCCTCCACATGCTCCAGGGGTTGTAGGAGGGGCTCAGCTGCGTGGGGGAGGGCTTTGTTGGGGCCGGGAGCGGGGTTCCACTGTCAGTGCTACCCATCAGATCGGTCAGGGGGGAagcagaggaagaagagaaggagtgTAGGGGGGAGTCAGAGGGGGGGCTGGTGGACCAGATGGAGGGGCTGAATGGAGGGCTGGAGCTGGGCTGGATGGGCCAGGGCTGTAGAGGCTGCAGGGACTCGTTTGGCCAGACGGACGGGGTGGTATGTCTGAACTCAGGCCAACTCTGCTGGGGCTCCATAGCACTCCTTCCCGCGGTCATCCCACTGAACACTACACAGCACAGTCAAGCGTCAACTGGTTTCCATATACgctgagtgtgcaaaacattagcaacaccttcctaatattgagttgcacccccttttgccttcGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737817 True 1311 lncRNA 0.45 2 12651639 12653753

Neighbor

gene id symbol gene type direction distance location
LOC110495529 LOC106575665 coding downstream 35480 12612014 ~ 12616159 (-)
LOC118941039 NA coding downstream 79250 12571503 ~ 12583644 (-)
LOC110527216 nud15 coding downstream 97768 12552668 ~ 12553871 (-)
LOC110528732 LOC105019714 coding downstream 144913 12470084 ~ 12506726 (-)
LOC110516060 LOC106575774 coding downstream 270646 12354052 ~ 12380993 (-)
LOC118941036 NA coding upstream 12093 12665846 ~ 12677668 (-)
LOC110527208 LOC106575754 coding upstream 29356 12683109 ~ 12695620 (-)
LOC110527202 LOC106574654 coding upstream 175850 12829603 ~ 12833072 (-)
LOC110495527 LOC106575752 coding upstream 179889 12833642 ~ 12837832 (-)
LOC110495524 LOC106575751 coding upstream 186441 12840194 ~ 12844442 (-)
G1517994 ipo5 non-coding downstream 85618 12562815 ~ 12566021 (-)
G1517981 NA non-coding downstream 96590 12554270 ~ 12555049 (-)
G1518000 NA non-coding downstream 101649 12542254 ~ 12549990 (-)
G1517999 NA non-coding downstream 113376 12538035 ~ 12538263 (-)
G1518076 NA non-coding upstream 51241 12704994 ~ 12705267 (-)
G1518082 NA non-coding upstream 65438 12719191 ~ 12719426 (-)
G1518095 NA non-coding upstream 93918 12747671 ~ 12747916 (-)
G1518134 NA non-coding upstream 227688 12881441 ~ 12882005 (-)
G1518100 creg1 non-coding upstream 228772 12882525 ~ 12885636 (-)
G1518019 LOC106575703 other downstream 51308 12583728 ~ 12600331 (-)
G1517902 NA other downstream 366007 12285078 ~ 12285632 (-)
LOC110495544 LOC106575695 other downstream 388570 12260777 ~ 12272188 (-)
LOC110512633 LOC106575771 other downstream 405896 12240234 ~ 12245743 (-)
G1517822 LOC106575686 other downstream 629199 12020772 ~ 12023228 (-)
LOC110495512 LOC106574713 other upstream 252458 12898791 ~ 12910954 (-)
LOC110513917 LOC106575727 other upstream 317900 12933662 ~ 13031321 (-)
bcor LOC106574692 other upstream 731003 13312628 ~ 13402659 (-)
G1518858 LOC106574768 other upstream 1085698 13739451 ~ 13741567 (-)
G1518991 NA other upstream 1317328 13971081 ~ 13972538 (-)

Expression


Co-expression Network