G1518134


Basic Information

Item Value
gene id G1518134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12881441 ~ 12882005 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737923
TGAATTTAATTAAAAGGTGGCTGAAGCCAGTAATTGGGGATGATTGTCGGGCATACTGTGCGTAGTGCAAATCAGACATGCTTGCAAAAATGTATGACATCAAAAACATTGTGCTACAGCAAAGCATATAAATAAAGCAAAACCGTACAACCCCACAACGCAGTCTACATTACCACAGTTGGTTAAGAAAGTGGATGACTACAAAAGGGCAGAAGCTACTATGGCAATGGCCATTGCAGAGCATTGTTAGATGCTAGCATGCAACCATTTAGGTATGGCTTGCAAAGCTGCCCAGATTCTGTGGCAGCAACAAACTTCCAAATGCACTGCACCAAGTGCACAGAAATGATTAGGGGAGTACTGGCTCCTTGTTTTCTCAAAAGGGTAACATCAGATGTGGGGGATGAGAAGTTCAATCTCCATTTGGATGAGTCCACTGATGTCAGAGTCTCGAAATACCTGCATGTGGTGATTCAGTATTTCAGTGCTAAAAAAATAACCGTTGGGTCCACATTTCTCAGGCTGGTTGAATTGGAGGGGGGTGATGCCAGATCAATAGTAAAGG

Function

NR:

description
uncharacterized protein LOC110527132

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737923 True 565 lncRNA 0.43 1 12881441 12882005

Neighbor

gene id symbol gene type direction distance location
LOC118941033 LOC106574652 coding downstream 7384 12869440 ~ 12874057 (-)
LOC118941031 LOC106574661 coding downstream 16068 12862329 ~ 12865373 (-)
LOC110512308 LOC106575728 coding downstream 19230 12857249 ~ 12862211 (-)
LOC118936561 LOC106575751 coding downstream 27661 12850090 ~ 12853780 (-)
LOC110495524 LOC106575751 coding downstream 36999 12840194 ~ 12844442 (-)
LOC110495512 LOC106574713 coding upstream 16786 12898791 ~ 12910954 (-)
LOC110519411 dusp27 coding upstream 30014 12912019 ~ 12922730 (-)
LOC110513917 LOC106575727 coding upstream 51657 12933662 ~ 13031321 (-)
LOC110495504 dylt3 coding upstream 199814 13081819 ~ 13084730 (-)
LOC110495506 LOC106574645 coding upstream 202838 13084843 ~ 13101678 (-)
G1518095 NA non-coding downstream 133525 12747671 ~ 12747916 (-)
G1518082 NA non-coding downstream 162015 12719191 ~ 12719426 (-)
G1518076 NA non-coding downstream 176174 12704994 ~ 12705267 (-)
G1518044 NA non-coding downstream 227688 12651639 ~ 12653753 (-)
LOC118941039 NA non-coding downstream 297797 12571503 ~ 12583644 (-)
G1518100 creg1 non-coding upstream 520 12882525 ~ 12885636 (-)
G1518139 NA non-coding upstream 21826 12903831 ~ 12904177 (-)
G1518143 NA non-coding upstream 41072 12923077 ~ 12923360 (-)
G1518145 NA non-coding upstream 43519 12925524 ~ 12925894 (-)
G1518019 LOC106575703 other downstream 281110 12583728 ~ 12600331 (-)
G1517902 NA other downstream 595809 12285078 ~ 12285632 (-)
LOC110495544 LOC106575695 other downstream 618372 12260777 ~ 12272188 (-)
LOC110512633 LOC106575771 other downstream 635698 12240234 ~ 12245743 (-)
G1517822 LOC106575686 other downstream 859001 12020772 ~ 12023228 (-)
bcor LOC106574692 other upstream 502751 13312628 ~ 13402659 (-)
G1518858 LOC106574768 other upstream 857446 13739451 ~ 13741567 (-)
G1518991 NA other upstream 1089076 13971081 ~ 13972538 (-)

Expression


Co-expression Network