G1518145



Basic Information


Item Value
gene id G1518145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12925524 ~ 12925894 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1737934
CACCGTCTTGGAGAGAGGCCATCATATCTGTAATCCCAAAAGAGGGTAAAGATAAGAAGGAATGCAGTTCATATAGACCTATCGCAATTCTTAACACGGATTATAAACTATATGCATCAATAGTAGCCAAAAGAATGGAGAACATAATCCCAGAATTGATTGATGGAGATCAAACTGGTTTCATACAAAATAGGCAGACACAGGACAATATAAGGAGAACACTAAATGTCATGGACCACATTACTCAGAATAAGACAAGTGCAATATGAATCAGTCTAGATGcagaaaaagcatttgattcagtGGGATGGGATTACCTATTCCAAGTTATGGAAAGATTGGGTTTCAACAAAGAAGTGACACAGTGCATC

Function


NR:

description
reverse transcriptase, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1737934 True 371 lncRNA 0.38 1 12925524 12925894

Neighbor


gene id symbol gene type direction distance location
LOC110519411 dusp27 coding downstream 2794 12912019 ~ 12922730 (-)
LOC110495512 LOC106574713 coding downstream 14570 12898791 ~ 12910954 (-)
LOC118941033 LOC106574652 coding downstream 51467 12869440 ~ 12874057 (-)
LOC118941031 LOC106574661 coding downstream 60151 12862329 ~ 12865373 (-)
LOC110512308 LOC106575728 coding downstream 63313 12857249 ~ 12862211 (-)
LOC110513917 LOC106575727 coding upstream 7768 12933662 ~ 13031321 (-)
LOC110495504 dylt3 coding upstream 155925 13081819 ~ 13084730 (-)
LOC110495506 LOC106574645 coding upstream 158949 13084843 ~ 13101678 (-)
bcor LOC106574692 coding upstream 386734 13312628 ~ 13402659 (-)
LOC110495500 cd80 coding upstream 480520 13406414 ~ 13409467 (-)
G1518143 NA non-coding downstream 2164 12923077 ~ 12923360 (-)
G1518139 NA non-coding downstream 21347 12903831 ~ 12904177 (-)
G1518100 creg1 non-coding downstream 39888 12882525 ~ 12885636 (-)
G1518134 NA non-coding downstream 43519 12881441 ~ 12882005 (-)
G1518149 NA non-coding upstream 19168 12945062 ~ 12952820 (-)
G1518164 NA non-coding upstream 60109 12986003 ~ 12988589 (-)
G1518171 NA non-coding upstream 117349 13043243 ~ 13043505 (-)
G1518172 NA non-coding upstream 118005 13043899 ~ 13047108 (-)
G1518174 NA non-coding upstream 122937 13048831 ~ 13049195 (-)
G1518019 LOC106575703 other downstream 325193 12583728 ~ 12600331 (-)
G1517902 NA other downstream 639892 12285078 ~ 12285632 (-)
LOC110495544 LOC106575695 other downstream 662455 12260777 ~ 12272188 (-)
LOC110512633 LOC106575771 other downstream 679781 12240234 ~ 12245743 (-)
G1518858 LOC106574768 other upstream 813557 13739451 ~ 13741567 (-)
G1518991 NA other upstream 1045187 13971081 ~ 13972538 (-)
G1519529 LOC106575569 other upstream 1558785 14484679 ~ 14486096 (-)

Expression



Co-expression Network