G1518164


Basic Information

Item Value
gene id G1518164
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12986003 ~ 12988589 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737955
GCTGTATATATTGTAGTTACAGTAAGTATTATGATGGGTTGCCTACTGTATATGTTGTAGTTACAGTAAGTATTATGATGGGTTGCCTGCTGTATATATTGTAGTTACAGTAAGTATTATGATGGGTTGCCTACAGTATATGTTGTAGTTACAGTAAGTATTATGATGGGttgcctacagtatatattgtagTTACAGTAAGTATTATGATGGGTTGCCTGCTGTATATATTGTAGTTACAGTAAGTATTATGATGGGTTGCCTATGTTGCAACACTACTACTGAAGTCAGTGATGCttatctggtgaacaggtcacaTGAACAGGGACCTTACTCTGACTGGACCCATCTAATTTGTCTAAGGTATTCTGTATCCTACTCAATTAAGCACTGACCATCTCTAACTAGTGTTATGACTACTGCACCTAATAGTGCTAATGCAGTGGAGGTAAGCTCTCACAGCACAGCCCCTCTATGACCACAGTCATAGCACTAATACAGTGGTAAGCTAGTCGCTTACTGTAGTAAGCTAGTCGTTCATAGTCTAATACATAGCGGAGGTAAGCTCTCAGCTGGTTGTTCATAGTCTAATATGTAGCGGAGGTCAGCTCTCAGCTGGTTGTTCATAGTCTAATATGTAGCGGAGGTCAGCTCTCAGCTGGTTGTTCATAGTCTAATACGTAGCGGAGGTAAGCTCTCAGCTGGTTGTTCATAGTCTAATACATAGCGGAGGTAAGCTCTCAGCTGGTTGTTCATAGTCTAAATGTAGAGGAGCTCTCAGCTGGTTGTTCATAGTCTAATATGTAGTGGAGCTCTCAGCTGGTCGTTCATAGTCTAATACGTTTAGTAATACGTTTAGTAAGATATTgcacacacccacatgcacacacacgtcaCCTACAGACAGCTAATCTCGCTCAGACAATGAGACCCTACCCACAAACACTGGCATATAGCTCTACTGTATTTTGACATCCTAGGAggatggtgggaggagctataggaggatgggctcattgtaatagaGTCAAAGTTCCATGTATTCCATTGCAGCCATTACAATGAAAGGAACTGGAAAGAgggatacatagtcagttgtacaactgaatgcatttaactgaaatgtgtcttccacatttaatccAACCTGACATCCACGTCATCAATGAGACCGTCCTCCTATCGCTCCTCCCACCAGTATATTGACCCTCTGGTTGACACACCAGTATGTATGTTGACTTGGTATATTGACCCACTGGTTGACataccagtatgtacagtatgttgactTGGTATATAGACCCTGTTTTCATCTTGTTCGTTGTTGTCATGAATAACTCATTATATGCCTCAAATTCATACTTAGAAGATAAGTAAgtaagatatttcagtttttaattttttataaattagaaaaaaaatctaaaaagctgtttttcgGTTTctgttgtggggtattgtgaagatttatatttatttaattattttagaataaggctataacataacaaaatgtggaaaaaggggaaggggtctgaatactttctgaatgcactgttcgTGTGCCTCAAACACTGCGAAGCGCCTATGAATAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737955 True 1598 lncRNA 0.40 4 12986003 12988589

Neighbor

gene id symbol gene type direction distance location
LOC110519411 dusp27 coding downstream 63273 12912019 ~ 12922730 (-)
LOC110495512 LOC106574713 coding downstream 75049 12898791 ~ 12910954 (-)
LOC118941033 LOC106574652 coding downstream 111946 12869440 ~ 12874057 (-)
LOC118941031 LOC106574661 coding downstream 120630 12862329 ~ 12865373 (-)
LOC110512308 LOC106575728 coding downstream 123792 12857249 ~ 12862211 (-)
LOC110495504 dylt3 coding upstream 93230 13081819 ~ 13084730 (-)
LOC110495506 LOC106574645 coding upstream 96254 13084843 ~ 13101678 (-)
bcor LOC106574692 coding upstream 324039 13312628 ~ 13402659 (-)
LOC110495500 cd80 coding upstream 417825 13406414 ~ 13409467 (-)
cd80 cd80 coding upstream 432793 13421382 ~ 13439064 (-)
G1518149 NA non-coding downstream 33183 12945062 ~ 12952820 (-)
G1518145 NA non-coding downstream 60109 12925524 ~ 12925894 (-)
G1518143 NA non-coding downstream 62643 12923077 ~ 12923360 (-)
G1518139 NA non-coding downstream 81826 12903831 ~ 12904177 (-)
G1518171 NA non-coding upstream 54654 13043243 ~ 13043505 (-)
G1518172 NA non-coding upstream 55310 13043899 ~ 13047108 (-)
G1518174 NA non-coding upstream 60242 13048831 ~ 13049195 (-)
G1518176 NA non-coding upstream 64008 13052597 ~ 13052796 (-)
G1518178 NA non-coding upstream 65138 13053727 ~ 13054035 (-)
LOC110513917 LOC106575727 other downstream 9562 12933662 ~ 13031321 (-)
G1518019 LOC106575703 other downstream 385672 12583728 ~ 12600331 (-)
G1517902 NA other downstream 700371 12285078 ~ 12285632 (-)
LOC110495544 LOC106575695 other downstream 722934 12260777 ~ 12272188 (-)
G1518858 LOC106574768 other upstream 750862 13739451 ~ 13741567 (-)
G1518991 NA other upstream 982492 13971081 ~ 13972538 (-)
G1519529 LOC106575569 other upstream 1496090 14484679 ~ 14486096 (-)
LOC110495482 LOC106575623 other upstream 1517811 14506227 ~ 14507592 (-)

Expression


Co-expression Network