G1518172



Basic Information


Item Value
gene id G1518172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13043899 ~ 13047108 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1737964
gagaagcggaccaaagcgcagcgtggtggttattcatgttttaataaatccctacacatgaacaaactaacaaaaacaagaaatgtgcaaacgcaaaacagtcctatcctgtgacaacaaacacagtgacaggaacaatcacccaccaacacacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1737964 True 241 lncRNA 0.43 2 13043899 13047108

Neighbor


gene id symbol gene type direction distance location
LOC110513917 LOC106575727 coding downstream 12578 12933662 ~ 13031321 (-)
LOC110519411 dusp27 coding downstream 121169 12912019 ~ 12922730 (-)
LOC110495512 LOC106574713 coding downstream 132945 12898791 ~ 12910954 (-)
LOC118941033 LOC106574652 coding downstream 169842 12869440 ~ 12874057 (-)
LOC118941031 LOC106574661 coding downstream 178526 12862329 ~ 12865373 (-)
LOC110495504 dylt3 coding upstream 34711 13081819 ~ 13084730 (-)
LOC110495506 LOC106574645 coding upstream 37735 13084843 ~ 13101678 (-)
bcor LOC106574692 coding upstream 265520 13312628 ~ 13402659 (-)
LOC110495500 cd80 coding upstream 359306 13406414 ~ 13409467 (-)
cd80 cd80 coding upstream 374274 13421382 ~ 13439064 (-)
G1518171 NA non-coding downstream 394 13043243 ~ 13043505 (-)
G1518164 NA non-coding downstream 55310 12986003 ~ 12988589 (-)
G1518149 NA non-coding downstream 91079 12945062 ~ 12952820 (-)
G1518145 NA non-coding downstream 118005 12925524 ~ 12925894 (-)
G1518143 NA non-coding downstream 120539 12923077 ~ 12923360 (-)
G1518174 NA non-coding upstream 1723 13048831 ~ 13049195 (-)
G1518176 NA non-coding upstream 5489 13052597 ~ 13052796 (-)
G1518178 NA non-coding upstream 6619 13053727 ~ 13054035 (-)
G1518216 NA non-coding upstream 105918 13153026 ~ 13153398 (-)
G1518217 NA non-coding upstream 110630 13157738 ~ 13158042 (-)
G1518019 LOC106575703 other downstream 443568 12583728 ~ 12600331 (-)
G1517902 NA other downstream 758267 12285078 ~ 12285632 (-)
LOC110495544 LOC106575695 other downstream 780830 12260777 ~ 12272188 (-)
G1518858 LOC106574768 other upstream 692343 13739451 ~ 13741567 (-)
G1518991 NA other upstream 923973 13971081 ~ 13972538 (-)
G1519529 LOC106575569 other upstream 1437571 14484679 ~ 14486096 (-)
LOC110495482 LOC106575623 other upstream 1459292 14506227 ~ 14507592 (-)

Expression



Co-expression Network