Gene
RNA
| Item | Value |
|---|---|
| gene id | G1518178 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 13053727 ~ 13054035 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1737970 | True | 309 | lncRNA | 0.37 | 1 | 13053727 | 13054035 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513917 | LOC106575727 | coding | downstream | 22406 | 12933662 ~ 13031321 (-) |
| LOC110519411 | dusp27 | coding | downstream | 130997 | 12912019 ~ 12922730 (-) |
| LOC110495512 | LOC106574713 | coding | downstream | 142773 | 12898791 ~ 12910954 (-) |
| LOC118941033 | LOC106574652 | coding | downstream | 179670 | 12869440 ~ 12874057 (-) |
| LOC118941031 | LOC106574661 | coding | downstream | 188354 | 12862329 ~ 12865373 (-) |
| LOC110495504 | dylt3 | coding | upstream | 27784 | 13081819 ~ 13084730 (-) |
| LOC110495506 | LOC106574645 | coding | upstream | 30808 | 13084843 ~ 13101678 (-) |
| bcor | LOC106574692 | coding | upstream | 258593 | 13312628 ~ 13402659 (-) |
| LOC110495500 | cd80 | coding | upstream | 352379 | 13406414 ~ 13409467 (-) |
| cd80 | cd80 | coding | upstream | 367347 | 13421382 ~ 13439064 (-) |
| G1518176 | NA | non-coding | downstream | 931 | 13052597 ~ 13052796 (-) |
| G1518174 | NA | non-coding | downstream | 4532 | 13048831 ~ 13049195 (-) |
| G1518172 | NA | non-coding | downstream | 6619 | 13043899 ~ 13047108 (-) |
| G1518171 | NA | non-coding | downstream | 10222 | 13043243 ~ 13043505 (-) |
| G1518164 | NA | non-coding | downstream | 65138 | 12986003 ~ 12988589 (-) |
| G1518216 | NA | non-coding | upstream | 98991 | 13153026 ~ 13153398 (-) |
| G1518217 | NA | non-coding | upstream | 103703 | 13157738 ~ 13158042 (-) |
| G1518225 | NA | non-coding | upstream | 125171 | 13179206 ~ 13184410 (-) |
| G1518226 | NA | non-coding | upstream | 128489 | 13182524 ~ 13184160 (-) |
| G1518229 | NA | non-coding | upstream | 139253 | 13193288 ~ 13194631 (-) |
| G1518019 | LOC106575703 | other | downstream | 453396 | 12583728 ~ 12600331 (-) |
| G1517902 | NA | other | downstream | 768095 | 12285078 ~ 12285632 (-) |
| LOC110495544 | LOC106575695 | other | downstream | 790658 | 12260777 ~ 12272188 (-) |
| G1518858 | LOC106574768 | other | upstream | 685416 | 13739451 ~ 13741567 (-) |
| G1518991 | NA | other | upstream | 917046 | 13971081 ~ 13972538 (-) |
| G1519529 | LOC106575569 | other | upstream | 1430644 | 14484679 ~ 14486096 (-) |
| LOC110495482 | LOC106575623 | other | upstream | 1452365 | 14506227 ~ 14507592 (-) |
