Gene
RNA
| Item | Value |
|---|---|
| gene id | G1518287 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 13299637 ~ 13299869 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cingulin-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1738095 | True | 233 | lncRNA | 0.45 | 1 | 13299637 | 13299869 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495506 | LOC106574645 | coding | downstream | 197959 | 13084843 ~ 13101678 (-) |
| LOC110495504 | dylt3 | coding | downstream | 214907 | 13081819 ~ 13084730 (-) |
| LOC110513917 | LOC106575727 | coding | downstream | 268316 | 12933662 ~ 13031321 (-) |
| LOC110519411 | dusp27 | coding | downstream | 376907 | 12912019 ~ 12922730 (-) |
| LOC110495512 | LOC106574713 | coding | downstream | 388683 | 12898791 ~ 12910954 (-) |
| bcor | LOC106574692 | coding | upstream | 12759 | 13312628 ~ 13402659 (-) |
| LOC110495500 | cd80 | coding | upstream | 106545 | 13406414 ~ 13409467 (-) |
| cd80 | cd80 | coding | upstream | 121513 | 13421382 ~ 13439064 (-) |
| LOC110495499 | LOC106575543 | coding | upstream | 166035 | 13465904 ~ 13470070 (-) |
| LOC110495493 | NA | coding | upstream | 385337 | 13685206 ~ 13699630 (-) |
| G1518273 | NA | non-coding | downstream | 15974 | 13283327 ~ 13283663 (-) |
| G1518251 | NA | non-coding | downstream | 67953 | 13231409 ~ 13231684 (-) |
| G1518229 | NA | non-coding | downstream | 105006 | 13193288 ~ 13194631 (-) |
| G1518225 | NA | non-coding | downstream | 115227 | 13179206 ~ 13184410 (-) |
| G1518226 | NA | non-coding | downstream | 115477 | 13182524 ~ 13184160 (-) |
| G1518706 | NA | non-coding | upstream | 116158 | 13416027 ~ 13481973 (-) |
| G1518716 | NA | non-coding | upstream | 150246 | 13450115 ~ 13451916 (-) |
| G1518735 | NA | non-coding | upstream | 183975 | 13483844 ~ 13484331 (-) |
| G1518749 | NA | non-coding | upstream | 198459 | 13498328 ~ 13499343 (-) |
| G1518019 | LOC106575703 | other | downstream | 699306 | 12583728 ~ 12600331 (-) |
| G1517902 | NA | other | downstream | 1014005 | 12285078 ~ 12285632 (-) |
| LOC110495544 | LOC106575695 | other | downstream | 1036568 | 12260777 ~ 12272188 (-) |
| G1518858 | LOC106574768 | other | upstream | 439582 | 13739451 ~ 13741567 (-) |
| G1518991 | NA | other | upstream | 671212 | 13971081 ~ 13972538 (-) |
| G1519529 | LOC106575569 | other | upstream | 1184810 | 14484679 ~ 14486096 (-) |
| LOC110495482 | LOC106575623 | other | upstream | 1206531 | 14506227 ~ 14507592 (-) |
