G1518749


Basic Information

Item Value
gene id G1518749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13498328 ~ 13499343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738678
CCTCCGCTCCAGTTTAATGTCCCTGTTTTCATGTCTTTTTGTCAGAGCCATGACAGCTAGAGGGAAGGATGAAGAAAAGAGCACTGTGCACTGAGTAGAGCAGTGTAGAGTAGagcagtgtagagtagagtagagtagagcagtgtagagtagagtagtgtagagtagagcagtgtagagtagtgtagtgtacagtagtgtagtgtacagtagtgtagtgtacagtagcatagtatagtgtagtatagagtagtgtacagtagagtagagcagtgtagagtagagcagtgtagagtagagtagagtagtgtagtgtacagtagtgtagtgtacagtagcatagtatagtgtagtatagagtagtgtacagtagagtagagcagtgtagagtagagcagtgtagagtagagtagagtagtgtagtgtacagtagtgtagtgtacagtagcatagtatagtgtagtatagagtagtgtacagtagagtagagcagtgtagagtagtgtagtgtacagtagtgtagtgtacagtagcatagtatagtgtagtatagagtagtgtacagtagagtagagcagtgtAGAGTAGTGAAGTGTAGAGTAATGTAGTGAagcatagtatagtgtagtatagtgtagggAAAGGCAGTGTAGTGCAGGGCAGAGTAGTAtagtgtagggtagagtagagtagaagtATTCTGTTCTGCTTTGCGAGGTCGACAGAAATTATGTCGTTATTGGTCCAAGTCTTGGCTctaccctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738678 True 821 lncRNA 0.42 2 13498328 13499343

Neighbor

gene id symbol gene type direction distance location
LOC110495499 LOC106575543 coding downstream 28258 13465904 ~ 13470070 (-)
cd80 cd80 coding downstream 59264 13421382 ~ 13439064 (-)
LOC110495500 cd80 coding downstream 88861 13406414 ~ 13409467 (-)
bcor LOC106574692 coding downstream 95669 13312628 ~ 13402659 (-)
LOC110495506 LOC106574645 coding downstream 396650 13084843 ~ 13101678 (-)
LOC110495493 NA coding upstream 185863 13685206 ~ 13699630 (-)
LOC110497005 LOC106574767 coding upstream 208051 13707394 ~ 13711944 (-)
LOC110495492 NA coding upstream 231017 13730360 ~ 13778831 (-)
LOC110495490 LOC106574769 coding upstream 296066 13795409 ~ 13800006 (-)
LOC110495489 LOC106575650 coding upstream 304038 13803381 ~ 13833406 (-)
G1518735 NA non-coding downstream 13997 13483844 ~ 13484331 (-)
G1518706 NA non-coding downstream 16355 13416027 ~ 13481973 (-)
G1518716 NA non-coding downstream 46412 13450115 ~ 13451916 (-)
G1518287 NA non-coding downstream 198459 13299637 ~ 13299869 (-)
G1518768 NA non-coding upstream 35554 13534897 ~ 13541351 (-)
G1518772 LOC106574749 non-coding upstream 46426 13545769 ~ 13552124 (-)
G1518783 NA non-coding upstream 65215 13564558 ~ 13564780 (-)
G1518784 NA non-coding upstream 66439 13565782 ~ 13566012 (-)
G1518797 NA non-coding upstream 86871 13586214 ~ 13586530 (-)
LOC110513917 LOC106575727 other downstream 521887 12933662 ~ 13031321 (-)
LOC110495512 LOC106574713 other downstream 587486 12898791 ~ 12910954 (-)
G1518019 LOC106575703 other downstream 897997 12583728 ~ 12600331 (-)
G1517902 NA other downstream 1212696 12285078 ~ 12285632 (-)
G1518858 LOC106574768 other upstream 240108 13739451 ~ 13741567 (-)
G1518991 NA other upstream 471738 13971081 ~ 13972538 (-)
G1519529 LOC106575569 other upstream 985336 14484679 ~ 14486096 (-)
LOC110495482 LOC106575623 other upstream 1007057 14506227 ~ 14507592 (-)
LOC110495477 fundc1 other upstream 1081626 14580962 ~ 14587615 (-)

Expression


Co-expression Network