G1518992


Basic Information

Item Value
gene id G1518992
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13969922 ~ 13970867 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738971
gtcattttacctCTACCGgaaacacctgtatatagccttgctactgttattttattgttgctccataattatttgttatatttctatatttctttcttaaaacggcattgttggttaagggcttgtaagtaagcatttcactgtaagatctacctacacctgttgtattcggcacatgtaataaatacaatttgatttgattttgtttctAATGATGTTCTACTCAGTATGCTCTTTAAACTCAATTCCTCTACCCCCTTCTCCCTCACACTGgatctctatttccctctcatACTGCCCACACTATCAGTACATGCTCCACTATCTCTGTTTCCTGGCAGTAATCACACCTTCCTGTGGTTGGTGACTAGAGGGAGCAGGTTAGCAGAGCATTTgagctaaacctaacccttttcctaaccttaatctAAGTCTTccaacctgccacgttaattatcctaacctgctgcgtaaactatcctaacctgctacgttaattatcctaacctccTGGgtaaattatcctaacctgctacgttaattatcctaacctccTGGgtaaattatcctaacctgctacgttaattatcctaacctgctgggtAAATTATCCTAACATGccacattaattatcctaacctgctgggtaaattatcctaacctgctacgttaattatcctaacctccTGGgtaaattatcctaacctgctacgttaattatcctaacctgctgggtaaattatcctaacctgctacattaattatcctaacctccTGGgtaaattatcctaacctgctatgttaattatcctaacctgctgggtaaattatcctaacctgctacgttaattgtCCTAACCTGCTGGgtaaattatcctaacctgctgggtAAATTGTCCTAACCTGCCGGGTAAATTGTCCTAACTTGCCGGGTAAACCCATTCCC
>TU1738970
gtcattttacctCTACCGgaaacacctgtatatagccttgctactgttattttattgttgctccataattatttgttatatttctatatttctttcttaaaacggcattgttggttaagggcttgtaagtaagcatttcactgtaagatctacctacacctgttgtattcggcacatgtaataaatacaatttgatttgattttgtttctAATGATGTTCTACTCAGTATGCTCTTTAAACTCAATTCCTCTACCCCCTTCTCCCTCACACTGgatctctatttccctctcatACTGCCCACACTATCAGTACATGCTCCACTATCTCTGTTTCCTGGCAGTAATCACACCTTCCTGTGGTTGGTGACTAGAGGGAGCAGGTTAGCAGAGCATTTgagctaaacctaacccttttcctaaccttaatctAAGTCTTccaacctgccacgttaatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738971 False 946 lncRNA 0.39 1 13969922 13970867
TU1738970 True 455 lncRNA 0.39 1 13970413 13970867

Neighbor

gene id symbol gene type direction distance location
LOC110495488 LOC106575654 coding downstream 95360 13865384 ~ 13874562 (-)
LOC110495489 LOC106575650 coding downstream 136516 13803381 ~ 13833406 (-)
LOC110495490 LOC106574769 coding downstream 169916 13795409 ~ 13800006 (-)
LOC110495492 NA coding downstream 191091 13730360 ~ 13778831 (-)
LOC110497005 LOC106574767 coding downstream 257978 13707394 ~ 13711944 (-)
LOC110495482 LOC106575623 coding upstream 535360 14506227 ~ 14507592 (-)
LOC110495480 LOC108249344 coding upstream 559714 14530581 ~ 14578088 (-)
LOC110495477 fundc1 coding upstream 610095 14580962 ~ 14587615 (-)
LOC110495478 NA coding upstream 672208 14643075 ~ 14662564 (-)
LOC110497004 LOC106575641 coding upstream 701299 14672166 ~ 14740105 (-)
G1518953 NA non-coding downstream 76050 13893372 ~ 13893872 (-)
G1518861 NA non-coding downstream 249753 13718110 ~ 13720169 (-)
G1518850 NA non-coding downstream 305201 13664465 ~ 13664721 (-)
G1518797 NA non-coding downstream 383392 13586214 ~ 13586530 (-)
G1518784 NA non-coding downstream 403910 13565782 ~ 13566012 (-)
G1518991 NA non-coding upstream 716 13971081 ~ 13972538 (-)
G1518994 NA non-coding upstream 2451 13973318 ~ 13973544 (-)
G1519364 NA non-coding upstream 189413 14160280 ~ 14160701 (-)
G1519372 NA non-coding upstream 197692 14168559 ~ 14168901 (-)
G1519382 NA non-coding upstream 213346 14184213 ~ 14184440 (-)
G1518858 LOC106574768 other downstream 228355 13739451 ~ 13741567 (-)
bcor LOC106574692 other downstream 567301 13312628 ~ 13402659 (-)
LOC110513917 LOC106575727 other downstream 993481 12933662 ~ 13031321 (-)
LOC110495512 LOC106574713 other downstream 1059080 12898791 ~ 12910954 (-)
G1518019 LOC106575703 other downstream 1369591 12583728 ~ 12600331 (-)
G1519529 LOC106575569 other upstream 513812 14484679 ~ 14486096 (-)
G1520339 NA other upstream 1305196 15276063 ~ 15277021 (-)

Expression


Co-expression Network