G1518991


Basic Information

Item Value
gene id G1518991
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 13971081 ~ 13972538 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1738967
ttaaagttagtgagagagatatgagtctccagcttcagtgatttttgcagttcgttacagtcattggcagcagagaagtggaaggaaaggcggctaaTGTAGGATTTGGCTTTGGGGGTAACCAgcgaaatatacctgctggagcgtgtgctacgggtgggtgctgctatggtgaccagtgagctgagataaggcggtgctttacctagcaaagacttgtagatgacctggagccagtgggtttggcgacgagtatgaagcgagggccagccaacgagagcatacaggccgCAGTTTtggatagtatatggggctttggtgacaaaacggatggcactgtgatagactgcatccaatttgttaagtagagtgctggaggctattttgtaaatgacatcgccgaagtcgaggatcggtagggtttacgggggtatgtttggcagcatgagtgaaggatgctttgttgcaaaattggaaagccaattctagatttaattttggattgtagatgcttgatgtgagtctggaaggagagtttacagtctaaccagacacctaggtatttgtagttgtccacatattctaagtcagaatcgtCCAGTAGTgatagtgatgctggacgggcgggcagagatcggttgaagggcatgcatttagttttacttgcgtttaagagcagttggaggccacggaaggagagttgtatggcattgaagctcgtctggaggttagttaacacagtgtccaaagaagggccagaagtatacagaatggtatcgtctgcgtagaggtggatcagagaatcaccagcagcaagagcgacatcattgatgtatacagaaaagagagtcggcccgagaattgaaccggGTTGCacgcccatagagactgccaaaggtccGGACAATTATAgttcaaacacactaagacagtcatgaagagggcacgacaacacctattcccccttgggagactgaaaagatttggcatgggtcctcagatcctcaaaaagttctacagctgcaccatcgatagcatcctgactggttgcatcaccgcctggtatggcaactgctcggcctctgaccgcaaggctacagagggtagtgcatacggaccagtacatcactggggccaagcttcctgccatccaggacctctataccaggcggtatcagaggaagacCCCATAAATtgccaaggactcca
>TU1738968
taaagcaaagcagttcgacacatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtagaacaattatatttacagtgtgtgaaaatgaggtaagataagggagttaaggcaataaataggccaaagtggcgaagtaattacaatatagcaattaaagttggatggactatttacagatgggctatgtacaggtgaagtgatctgtgagctgctcttacagctggtgcttaaagttagtgagagagatatgagtctccagcttcagtgatttttgcagttcgttacagtcattggcagcagagaagtggaaggaaaggcggctaaTGTAGGATTTGGCTTTGGGGGTAACCAgcgaaatatacctgctggagcgtgtgctacgggtgggtgctgctatggtgaccagtgagctgagataaggcggtgctttacctagcaaagacttgtagatgacctggagccagtgggtttggcgacgagtatgaagcgagggccagccaacgagagcatacaggccgCAGTTTtggatagtatatggggctttggtgacaaaacggatggcactgtgatagactgcatccaatttgttaagtagagtgctggaggctattttgtaaatgacatcgccgaagtcgaggatcggtagggtttacgggggtatgtttggcagcatgagtgaaggatgctttgttgcaaaattggaaagccaattctagatttaattttggattgtagatgcttgatgtgagtctggaaggagagtttacagtctaaccagacacctaggtatttgtagttgtccacatattctaagtcagaatcgtCCAGTAGTgatagtgatgctggacgggcgggcagagatcggttgaagggcatgcatttagttttacttgcgtttaagagcagttggaggccacggaaggagagttgtatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1738967 False 1209 TUCP 0.49 1 13971081 13972289
TU1738968 True 956 lncRNA 0.45 1 13971583 13972538

Neighbor

gene id symbol gene type direction distance location
LOC110495488 LOC106575654 coding downstream 97021 13865384 ~ 13874562 (-)
LOC110495489 LOC106575650 coding downstream 138177 13803381 ~ 13833406 (-)
LOC110495490 LOC106574769 coding downstream 171577 13795409 ~ 13800006 (-)
LOC110495492 NA coding downstream 192752 13730360 ~ 13778831 (-)
LOC110497005 LOC106574767 coding downstream 259639 13707394 ~ 13711944 (-)
LOC110495482 LOC106575623 coding upstream 533689 14506227 ~ 14507592 (-)
LOC110495480 LOC108249344 coding upstream 558043 14530581 ~ 14578088 (-)
LOC110495477 fundc1 coding upstream 608424 14580962 ~ 14587615 (-)
LOC110495478 NA coding upstream 670537 14643075 ~ 14662564 (-)
LOC110497004 LOC106575641 coding upstream 699628 14672166 ~ 14740105 (-)
G1518992 NA non-coding downstream 716 13969922 ~ 13970867 (-)
G1518953 NA non-coding downstream 77711 13893372 ~ 13893872 (-)
G1518861 NA non-coding downstream 251414 13718110 ~ 13720169 (-)
G1518850 NA non-coding downstream 306862 13664465 ~ 13664721 (-)
G1518797 NA non-coding downstream 385053 13586214 ~ 13586530 (-)
G1518994 NA non-coding upstream 780 13973318 ~ 13973544 (-)
G1519364 NA non-coding upstream 187742 14160280 ~ 14160701 (-)
G1519372 NA non-coding upstream 196021 14168559 ~ 14168901 (-)
G1519382 NA non-coding upstream 211675 14184213 ~ 14184440 (-)
G1519383 NA non-coding upstream 211945 14184483 ~ 14184728 (-)
G1518858 LOC106574768 other downstream 230016 13739451 ~ 13741567 (-)
bcor LOC106574692 other downstream 568962 13312628 ~ 13402659 (-)
LOC110513917 LOC106575727 other downstream 995142 12933662 ~ 13031321 (-)
LOC110495512 LOC106574713 other downstream 1060741 12898791 ~ 12910954 (-)
G1518019 LOC106575703 other downstream 1371252 12583728 ~ 12600331 (-)
G1519529 LOC106575569 other upstream 512141 14484679 ~ 14486096 (-)
G1520339 NA other upstream 1303525 15276063 ~ 15277021 (-)
LOC110495442 LOC106574707 other upstream 1526370 15434412 ~ 15500787 (-)

Expression


Co-expression Network