G1519226


Basic Information

Item Value
gene id G1519226
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14321789 ~ 14322013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739227
TTGTAAAGCCTATTTATATTGCCTCTGCTTCTTACGGTATACattgccaccaccaccaccaccaccaccagttaTTTGCCTCTGAGTTAAAGGCTTTGAACAACAATGACAGATAAATACAAATACAGATTTCGGCGATGCCATATGTCGTACCCAAGAGTATGTTTCATTGCAGCgcgaatacattttttaaagtttATGGTAAATAGGCTGGCACTTCACAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739227 True 225 lncRNA 0.40 1 14321789 14322013

Neighbor

gene id symbol gene type direction distance location
LOC110495485 LOC106575653 coding upstream 341902 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 352600 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 510501 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 698971 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 765437 13520158 ~ 13556352 (+)
LOC110495481 LOC106574739 coding downstream 234963 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 266638 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 431423 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 457077 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 470924 14792937 ~ 14799311 (+)
G1519209 NA non-coding upstream 35745 14285215 ~ 14286044 (+)
G1519196 NA non-coding upstream 57706 14263286 ~ 14264083 (+)
G1519182 NA non-coding upstream 81590 14239775 ~ 14240199 (+)
G1519177 NA non-coding upstream 98736 14222715 ~ 14223053 (+)
G1519170 NA non-coding upstream 107724 14213825 ~ 14214065 (+)
G1519228 NA non-coding downstream 3514 14325527 ~ 14325788 (+)
G1519229 NA non-coding downstream 4398 14326411 ~ 14326667 (+)
G1519231 NA non-coding downstream 5951 14327964 ~ 14328225 (+)
G1519232 NA non-coding downstream 7409 14329422 ~ 14329708 (+)
G1519233 NA non-coding downstream 7937 14329950 ~ 14330179 (+)
G1517545 NA other upstream 1133709 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1379295 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1385511 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1449626 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2380684 11940062 ~ 11941897 (+)
G1519096 NA other downstream 112749 14434762 ~ 14436120 (+)
G1519538 NA other downstream 176773 14498786 ~ 14499137 (+)
G1519733 NA other downstream 491969 14813982 ~ 14814886 (+)
il8r il8r other downstream 576243 14898154 ~ 14901354 (+)

Expression


Co-expression Network