G1519228


Basic Information

Item Value
gene id G1519228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14325527 ~ 14325788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739229
GACATGTTTGCCTGCTAATGTAAATAACATCTCACTCTGTCTAAAAGTAGACCAAACAAAAAGTAATGTGTTTCACCTTGGTCCTGATCTGGTGTCTGTATTTTCCCACGGATGGATGTTTCATAATGCTTTTATCACAACGATCTTAATGTAGTCAGTGAGTACAACACTGTACAGTACCTTCTATCCAAAGAGAATAGTGGTGACTCAGAGACCCCATTTAGGAGcactcccccacccccaccccttcataaagagcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739229 True 262 lncRNA 0.42 1 14325527 14325788

Neighbor

gene id symbol gene type direction distance location
LOC110495485 LOC106575653 coding upstream 345640 13975110 ~ 13979887 (+)
LOC110495487 LOC106574771 coding upstream 356338 13883956 ~ 13969189 (+)
LOC118941229 NA coding upstream 514239 13811236 ~ 13811288 (+)
LOC110495495 LOC106574775 coding upstream 702709 13592980 ~ 13622818 (+)
LOC110497006 LOC106574795 coding upstream 769175 13520158 ~ 13556352 (+)
LOC110495481 LOC106574739 coding downstream 231188 14556326 ~ 14558589 (+)
LOC110495476 LOC106575616 coding downstream 262863 14588651 ~ 14643860 (+)
LOC110495457 LOC106573985 coding downstream 427648 14753436 ~ 14764586 (+)
LOC110496915 LOC106575634 coding downstream 453302 14779090 ~ 14780827 (+)
zgc:92380 LOC106575639 coding downstream 467149 14792937 ~ 14799311 (+)
G1519226 NA non-coding upstream 3514 14321789 ~ 14322013 (+)
G1519209 NA non-coding upstream 39483 14285215 ~ 14286044 (+)
G1519196 NA non-coding upstream 61444 14263286 ~ 14264083 (+)
G1519182 NA non-coding upstream 85328 14239775 ~ 14240199 (+)
G1519177 NA non-coding upstream 102474 14222715 ~ 14223053 (+)
G1519229 NA non-coding downstream 623 14326411 ~ 14326667 (+)
G1519231 NA non-coding downstream 2176 14327964 ~ 14328225 (+)
G1519232 NA non-coding downstream 3634 14329422 ~ 14329708 (+)
G1519233 NA non-coding downstream 4162 14329950 ~ 14330179 (+)
G1519234 NA non-coding downstream 4465 14330253 ~ 14330776 (+)
G1517545 NA other upstream 1137447 13187101 ~ 13188080 (+)
G1517457 NA other upstream 1383033 12937523 ~ 12942494 (+)
G1517456 LOC106575727 other upstream 1389249 12934654 ~ 12936278 (+)
G1517414 LOC106575752 other upstream 1453364 12833651 ~ 12872163 (+)
G1517150 NA other upstream 2384422 11940062 ~ 11941897 (+)
G1519096 NA other downstream 108974 14434762 ~ 14436120 (+)
G1519538 NA other downstream 172998 14498786 ~ 14499137 (+)
G1519733 NA other downstream 488194 14813982 ~ 14814886 (+)
il8r il8r other downstream 572468 14898154 ~ 14901354 (+)

Expression


Co-expression Network