G1519521


Basic Information

Item Value
gene id G1519521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14465372 ~ 14469636 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1739552
gaggatattagtaacacacagaccagcctattactacactatagaggatattagtaacacacagaccagtctattactacactatagaggatattagtaacacacagaccagtctattactacactatagaggatacagaccagtccgttactacactatagaggatattagtaacacacagaccagtctattactacactatagaggatacagaccagtccattactatactatagaggatattagtaacacacagaccagtctattactacactatagaggatacagaccagtctattactacactatagaggatacagaccagtccattactacactatagaggatacagaccaggccattactacactatagaggatattagtaacatacagaccagtccattactacactatagaggatacagaccagtccattactacactatagaggatattagtaacacacagaccagtctattactacactatagaggatattactaacatacagaccagtccattactacactatagcggatacagaccagtccattactacactatagaggatacagaccagtccattactacactatagaggatattagtaacacacagaccagtctattactactctatagaggatacagaccagtctattactgcaCTATAGAGAGTAgtagtaacacacagaccagtctattactacactataggggatacagaccagtccatgactacactatagaggatattagttacacacagaccagtctattactacactatagaggatattagtaacacacagaccagtccattactacactatagaggacacagaccagtctattactacactatagatgaTATTAGTTACACacagaccagtccattactacactatagaggatattagtaacacacagaccagtctattactacactatagaggacacagaccagtctattactacactatagaggatattagtaacacacagatcagtctattactacactatagaggatattagtaacacacagaccagtctattactacactatagaggacacaaaccagtctattactacactatagaggatattaaccagtccattactacactatagaggatacagaccagtccattactacactatagaggatacagaccagtctattagtACACAATAGAGGATGCAGACCAGTCCATTACTtcactatagaggatattagtaacacacagaccagtctattac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1739552 True 1266 lncRNA 0.38 5 14465372 14469636

Neighbor

gene id symbol gene type direction distance location
LOC110495488 LOC106575654 coding downstream 590810 13865384 ~ 13874562 (-)
LOC110495489 LOC106575650 coding downstream 631966 13803381 ~ 13833406 (-)
LOC110495490 LOC106574769 coding downstream 665366 13795409 ~ 13800006 (-)
LOC110495492 NA coding downstream 686541 13730360 ~ 13778831 (-)
LOC110497005 LOC106574767 coding downstream 753428 13707394 ~ 13711944 (-)
LOC110495482 LOC106575623 coding upstream 36591 14506227 ~ 14507592 (-)
LOC110495480 LOC108249344 coding upstream 60945 14530581 ~ 14578088 (-)
LOC110495477 fundc1 coding upstream 111326 14580962 ~ 14587615 (-)
LOC110495478 NA coding upstream 173439 14643075 ~ 14662564 (-)
LOC110497004 LOC106575641 coding upstream 202530 14672166 ~ 14740105 (-)
G1519514 NA non-coding downstream 11941 14453073 ~ 14453431 (-)
G1519511 NA non-coding downstream 29837 14433556 ~ 14435535 (-)
G1519510 NA non-coding downstream 31872 14433209 ~ 14433500 (-)
G1519509 NA non-coding downstream 32583 14432577 ~ 14432789 (-)
G1519507 NA non-coding downstream 37827 14427329 ~ 14427545 (-)
G1519524 NA non-coding upstream 8986 14478622 ~ 14479024 (-)
G1519530 NA non-coding upstream 17077 14486713 ~ 14489248 (-)
G1519531 NA non-coding upstream 19742 14489378 ~ 14489595 (-)
G1519532 NA non-coding upstream 20060 14489696 ~ 14492566 (-)
G1519535 NA non-coding upstream 26058 14495694 ~ 14495925 (-)
G1518991 NA other downstream 493083 13971081 ~ 13972538 (-)
G1518858 LOC106574768 other downstream 723805 13739451 ~ 13741567 (-)
bcor LOC106574692 other downstream 1062751 13312628 ~ 13402659 (-)
LOC110513917 LOC106575727 other downstream 1488931 12933662 ~ 13031321 (-)
LOC110495512 LOC106574713 other downstream 1554530 12898791 ~ 12910954 (-)
G1519529 LOC106575569 other upstream 15043 14484679 ~ 14486096 (-)
G1520339 NA other upstream 806427 15276063 ~ 15277021 (-)
LOC110495442 LOC106574707 other upstream 1029272 15434412 ~ 15500787 (-)

Expression


Co-expression Network