Gene
RNA
| Item | Value |
|---|---|
| gene id | G1519531 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 14489378 ~ 14489595 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tripartite motif-containing protein 16-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1739563 | True | 218 | lncRNA | 0.48 | 1 | 14489378 | 14489595 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495488 | LOC106575654 | coding | downstream | 614816 | 13865384 ~ 13874562 (-) |
| LOC110495489 | LOC106575650 | coding | downstream | 655972 | 13803381 ~ 13833406 (-) |
| LOC110495490 | LOC106574769 | coding | downstream | 689372 | 13795409 ~ 13800006 (-) |
| LOC110495492 | NA | coding | downstream | 710547 | 13730360 ~ 13778831 (-) |
| LOC110497005 | LOC106574767 | coding | downstream | 777434 | 13707394 ~ 13711944 (-) |
| LOC110495482 | LOC106575623 | coding | upstream | 16632 | 14506227 ~ 14507592 (-) |
| LOC110495480 | LOC108249344 | coding | upstream | 40986 | 14530581 ~ 14578088 (-) |
| LOC110495477 | fundc1 | coding | upstream | 91367 | 14580962 ~ 14587615 (-) |
| LOC110495478 | NA | coding | upstream | 153480 | 14643075 ~ 14662564 (-) |
| LOC110497004 | LOC106575641 | coding | upstream | 182571 | 14672166 ~ 14740105 (-) |
| G1519530 | NA | non-coding | downstream | 130 | 14486713 ~ 14489248 (-) |
| G1519524 | NA | non-coding | downstream | 10354 | 14478622 ~ 14479024 (-) |
| G1519521 | NA | non-coding | downstream | 19742 | 14465372 ~ 14469636 (-) |
| G1519514 | NA | non-coding | downstream | 35947 | 14453073 ~ 14453431 (-) |
| G1519511 | NA | non-coding | downstream | 53843 | 14433556 ~ 14435535 (-) |
| G1519532 | NA | non-coding | upstream | 101 | 14489696 ~ 14492566 (-) |
| G1519535 | NA | non-coding | upstream | 6099 | 14495694 ~ 14495925 (-) |
| G1519570 | NA | non-coding | upstream | 25715 | 14515310 ~ 14515523 (-) |
| G1519574 | NA | non-coding | upstream | 35786 | 14525381 ~ 14525666 (-) |
| G1519575 | NA | non-coding | upstream | 37380 | 14526975 ~ 14527514 (-) |
| G1519529 | LOC106575569 | other | downstream | 3282 | 14484679 ~ 14486096 (-) |
| G1518991 | NA | other | downstream | 517089 | 13971081 ~ 13972538 (-) |
| G1518858 | LOC106574768 | other | downstream | 747811 | 13739451 ~ 13741567 (-) |
| bcor | LOC106574692 | other | downstream | 1086757 | 13312628 ~ 13402659 (-) |
| LOC110513917 | LOC106575727 | other | downstream | 1512937 | 12933662 ~ 13031321 (-) |
| G1520339 | NA | other | upstream | 786468 | 15276063 ~ 15277021 (-) |
| LOC110495442 | LOC106574707 | other | upstream | 1009313 | 15434412 ~ 15500787 (-) |
| G1521308 | NA | other | upstream | 1058281 | 15547876 ~ 15548483 (-) |
