G1520132


Basic Information

Item Value
gene id G1520132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14818848 ~ 14820002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740342
ggagtgaacccacaggatggtagttatccaggaacagggttggagagaggaccTATAGGATGGTAGTCctccaggaatagggttggagAGAGGACCTATAGGATGGTAGttttccaggaacagggttggagagaggacctacagcacagtagctctccaggaacagggttggagtgaggacctataggatggtagttctccaggaacagggttggggagaggacCTataggatggtagttctccaggaacagggttggggagaggacctataggatggtagttctccaggaacagggttggagaggacCTATAGTATGGTAGttttccaggaacagggttggagtgaacctataggatggtagttctccaggaacacgGTTGGAGTGAGGACCTataggatggtagttctccaggaacacgGTTGGAGTGAGGACCTataggatggtagttctccaggaacacg
>TU1740343
TGCAcgtgaccaatagggcctgacctatagcatatcatagtcacatcaataaattggttcTAACAAACTCTGAACACCATAACATGtgtgacagcaaaatggatgcagaggacGTGACCAACTGGAAAcgggaatgtttactggttgtgCAGGAGGTAAAAGGGAAGTCAGATGTCTGGAATACATTTGACTAGTTGTAGTAAatactggagatcaagaaaaatGTGTTATGGAGCGCtgggatggtagttctccaggaacagggttggagtgaacccgCAGGATGGTAGttatccaggaacagggttggggagtgAACCCACagcacagtagctctccaggaacagggttggagtgaacccacaggatggtagttatccaggaacagggttggagagaggaccTATAGGATGGTAGTCctccaggaatagggttggagAGAGGACCTATAGGATGGTAGttttccaggaacagggttggagagaggacctacagcacagtagctctccaggaacagggttggagtgaggacctataggatggtagttctccaggaacagggttggggagaggacCTataggatggtagttctccaggaacagggttggggagaggacctataggatggtagttctccaggaacagggttggagaggacCTATAGTATGGTAGttttccaggaacagggttggagtgaacctataggatggtagttctccaggaacacgGTTGGAGTGAGGACCTataggatggtagttctccaggaacacgGTTGGAGTGAGGACCTataggatggtagttctccaggaacacg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740342 False 464 lncRNA 0.51 2 14818848 14819608
TU1740343 True 815 lncRNA 0.49 3 14818848 14820002

Neighbor

gene id symbol gene type direction distance location
LOC110495456 LOC106575637 coding downstream 25902 14784852 ~ 14792946 (-)
LOC110495458 LOC106575627 coding downstream 66309 14751585 ~ 14752539 (-)
LOC110497004 LOC106575641 coding downstream 78743 14672166 ~ 14740105 (-)
LOC110495478 NA coding downstream 156284 14643075 ~ 14662564 (-)
LOC110495477 fundc1 coding downstream 231233 14580962 ~ 14587615 (-)
igfbp2 igfbp-2a coding upstream 366823 15186825 ~ 15203204 (-)
inh inh coding upstream 446648 15266650 ~ 15268117 (-)
LOC110495436 LOC106574694 coding upstream 525978 15345980 ~ 15406547 (-)
LOC110495442 LOC106574707 coding upstream 673567 15434412 ~ 15500787 (-)
LOC110495447 LOC106575526 coding upstream 775083 15595085 ~ 15600875 (-)
G1520128 NA non-coding downstream 7683 14810557 ~ 14811165 (-)
G1520063 NA non-coding downstream 119492 14698720 ~ 14699356 (-)
G1519996 NA non-coding downstream 253388 14565146 ~ 14565460 (-)
G1519987 NA non-coding downstream 282208 14536117 ~ 14536640 (-)
G1520149 NA non-coding upstream 87410 14907412 ~ 14907611 (-)
G1520153 NA non-coding upstream 91910 14911912 ~ 14921507 (-)
G1520159 NA non-coding upstream 111715 14931717 ~ 14931957 (-)
G1520161 NA non-coding upstream 114239 14934241 ~ 14934533 (-)
G1520163 NA non-coding upstream 124669 14944671 ~ 14945241 (-)
LOC110495482 LOC106575623 other downstream 311530 14506227 ~ 14507592 (-)
G1519529 LOC106575569 other downstream 332752 14484679 ~ 14486096 (-)
G1518991 NA other downstream 846559 13971081 ~ 13972538 (-)
G1518858 LOC106574768 other downstream 1077281 13739451 ~ 13741567 (-)
G1520339 NA other upstream 456061 15276063 ~ 15277021 (-)
G1521308 NA other upstream 727874 15547876 ~ 15548483 (-)
LOC110495443 LOC106574666 other upstream 782835 15601688 ~ 15604709 (-)
G1521387 NA other upstream 865899 15685901 ~ 15815957 (-)

Expression


Co-expression Network