Gene
RNA
| Item | Value |
|---|---|
| gene id | G1520306 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 15218318 ~ 15218902 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1740546 | False | 585 | lncRNA | 0.49 | 1 | 15218318 | 15218902 |
| TU1740547 | True | 216 | lncRNA | 0.61 | 1 | 15218318 | 15218533 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| igfbp2 | igfbp-2a | coding | downstream | 15114 | 15186825 ~ 15203204 (-) |
| LOC110495454 | LOC106575630 | coding | downstream | 388194 | 14814602 ~ 14830124 (-) |
| LOC110495456 | LOC106575637 | coding | downstream | 425372 | 14784852 ~ 14792946 (-) |
| LOC110495458 | LOC106575627 | coding | downstream | 465779 | 14751585 ~ 14752539 (-) |
| LOC110497004 | LOC106575641 | coding | downstream | 478213 | 14672166 ~ 14740105 (-) |
| inh | inh | coding | upstream | 47748 | 15266650 ~ 15268117 (-) |
| LOC110495436 | LOC106574694 | coding | upstream | 127078 | 15345980 ~ 15406547 (-) |
| LOC110495442 | LOC106574707 | coding | upstream | 274667 | 15434412 ~ 15500787 (-) |
| LOC110495447 | LOC106575526 | coding | upstream | 376183 | 15595085 ~ 15600875 (-) |
| LOC110495443 | LOC106574666 | coding | upstream | 382786 | 15601688 ~ 15604709 (-) |
| G1520304 | NA | non-coding | downstream | 1428 | 15216683 ~ 15216890 (-) |
| G1520298 | NA | non-coding | downstream | 7787 | 15210102 ~ 15210531 (-) |
| G1520294 | NA | non-coding | downstream | 10196 | 15207919 ~ 15208122 (-) |
| G1520293 | NA | non-coding | downstream | 10547 | 15207299 ~ 15207771 (-) |
| G1520292 | NA | non-coding | downstream | 11149 | 15206885 ~ 15207169 (-) |
| G1520313 | LOC106575539 | non-coding | upstream | 27892 | 15246794 ~ 15247203 (-) |
| G1520296 | NA | non-coding | upstream | 29976 | 15248878 ~ 15250297 (-) |
| G1520295 | NA | non-coding | upstream | 31881 | 15250783 ~ 15251851 (-) |
| G1520325 | NA | non-coding | upstream | 33636 | 15252538 ~ 15253076 (-) |
| G1520326 | NA | non-coding | upstream | 34630 | 15253532 ~ 15253780 (-) |
| LOC110495477 | fundc1 | other | downstream | 630759 | 14580962 ~ 14587615 (-) |
| LOC110495482 | LOC106575623 | other | downstream | 711000 | 14506227 ~ 14507592 (-) |
| G1519529 | LOC106575569 | other | downstream | 732222 | 14484679 ~ 14486096 (-) |
| G1518991 | NA | other | downstream | 1246029 | 13971081 ~ 13972538 (-) |
| G1518858 | LOC106574768 | other | downstream | 1476751 | 13739451 ~ 13741567 (-) |
| G1520339 | NA | other | upstream | 57161 | 15276063 ~ 15277021 (-) |
| G1521308 | NA | other | upstream | 328974 | 15547876 ~ 15548483 (-) |
| G1521387 | NA | other | upstream | 466999 | 15685901 ~ 15815957 (-) |
