G1520367


Basic Information

Item Value
gene id G1520367
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15318609 ~ 15319407 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1740627
ATATCTCGACCAGACACATTTATCATGTTCTTAGTCCAACCAGAACCTTAACCACTCACCATAGGTAAGTGATAACCCCAATAGGCCtgtgaacagagagagggagagaaatgactTTCAGAGGGcaagatgaaggagagagggagagagcgataaAATCATGGTTAATCAGGAAATTGATTAAAGGAGTCTCCAGCCCCCTCCCCCGACCAGGTGCTCACCAGATGTCTGTTGCCTTGGAGACTGGCGTTTGGTTAACGATCTCCGGGGCAACAAATTCCGGAGTGCCGTATTTGCAGTAGTGGGCTTCATTGGTCCCCAGTTTGACGGCATTGCCAAAGTCACAGATGCGGATCTTGTCACTGTGTCGGCCTGCCATGAGGATGTTCTCAGGCTGGGTGAGTTGGATGAAAACAGGGAATTATTAAGCTAGGTTTCTGTCCAATcggcaacagattttcatgctaatattcaaaaatacaaataaaatgtacaTTAGAGACCATCCTCTGTAATTTGATCTATGTAAAACTATGACTTGATTTGTGTAATGTTATTCATTTTAGTGTACATGTTTTGAGTGAGGAAAATACATTGGTATCTGAGTAGTATGTATTCTTGGGTTTGAAATATTCTTTCCTTGTTATATTAAGTAAGTTGATAATTGCAGAAGTAtctgttatacagtgccttctgaaagtattcagaccccttgacttttttccacattttgttacgttacggccttattctaaaattgattaaataaaaataaaaaactcagcaatctacacacaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1740627 True 799 lncRNA 0.40 1 15318609 15319407

Neighbor

gene id symbol gene type direction distance location
inh inh coding downstream 50492 15266650 ~ 15268117 (-)
igfbp2 igfbp-2a coding downstream 115405 15186825 ~ 15203204 (-)
LOC110495454 LOC106575630 coding downstream 488485 14814602 ~ 14830124 (-)
LOC110495456 LOC106575637 coding downstream 525663 14784852 ~ 14792946 (-)
LOC110495458 LOC106575627 coding downstream 566070 14751585 ~ 14752539 (-)
LOC110495436 LOC106574694 coding upstream 26573 15345980 ~ 15406547 (-)
LOC110495442 LOC106574707 coding upstream 174162 15434412 ~ 15500787 (-)
LOC110495447 LOC106575526 coding upstream 275678 15595085 ~ 15600875 (-)
LOC110495443 LOC106574666 coding upstream 282281 15601688 ~ 15604709 (-)
LOC110495638 LOC106575588 coding upstream 386215 15705622 ~ 15710368 (-)
G1520363 NA non-coding downstream 2696 15315643 ~ 15315913 (-)
G1520362 NA non-coding downstream 3895 15314507 ~ 15314714 (-)
G1520361 NA non-coding downstream 4706 15313161 ~ 15313903 (-)
G1520311 LOC106574702 non-coding downstream 18270 15297672 ~ 15300339 (-)
G1520351 NA non-coding downstream 23351 15294991 ~ 15295258 (-)
G1520368 NA non-coding upstream 8 15319415 ~ 15319724 (-)
G1520365 NA non-coding upstream 4366 15323773 ~ 15324245 (-)
G1520366 NA non-coding upstream 4863 15324270 ~ 15324729 (-)
G1520369 NA non-coding upstream 6683 15326090 ~ 15327178 (-)
G1520398 NA non-coding upstream 88592 15407999 ~ 15408365 (-)
G1520339 NA other downstream 41588 15276063 ~ 15277021 (-)
LOC110495477 fundc1 other downstream 731050 14580962 ~ 14587615 (-)
LOC110495482 LOC106575623 other downstream 811291 14506227 ~ 14507592 (-)
G1519529 LOC106575569 other downstream 832513 14484679 ~ 14486096 (-)
G1518991 NA other downstream 1346320 13971081 ~ 13972538 (-)
G1521308 NA other upstream 228469 15547876 ~ 15548483 (-)
G1521387 NA other upstream 366494 15685901 ~ 15815957 (-)
LOC110497059 donson other upstream 551569 15869734 ~ 15873958 (-)

Expression


Co-expression Network