Gene
RNA
| Item | Value |
|---|---|
| gene id | G1520365 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 15323773 ~ 15324245 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| striated muscle preferentially expressed protein kinase-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1740625 | True | 473 | lncRNA | 0.51 | 1 | 15323773 | 15324245 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| inh | inh | coding | downstream | 55656 | 15266650 ~ 15268117 (-) |
| igfbp2 | igfbp-2a | coding | downstream | 120569 | 15186825 ~ 15203204 (-) |
| LOC110495454 | LOC106575630 | coding | downstream | 493649 | 14814602 ~ 14830124 (-) |
| LOC110495456 | LOC106575637 | coding | downstream | 530827 | 14784852 ~ 14792946 (-) |
| LOC110495458 | LOC106575627 | coding | downstream | 571234 | 14751585 ~ 14752539 (-) |
| LOC110495436 | LOC106574694 | coding | upstream | 21735 | 15345980 ~ 15406547 (-) |
| LOC110495442 | LOC106574707 | coding | upstream | 169324 | 15434412 ~ 15500787 (-) |
| LOC110495447 | LOC106575526 | coding | upstream | 270840 | 15595085 ~ 15600875 (-) |
| LOC110495443 | LOC106574666 | coding | upstream | 277443 | 15601688 ~ 15604709 (-) |
| LOC110495638 | LOC106575588 | coding | upstream | 381377 | 15705622 ~ 15710368 (-) |
| G1520368 | NA | non-coding | downstream | 4049 | 15319415 ~ 15319724 (-) |
| G1520367 | NA | non-coding | downstream | 4366 | 15318609 ~ 15319407 (-) |
| G1520363 | NA | non-coding | downstream | 7860 | 15315643 ~ 15315913 (-) |
| G1520362 | NA | non-coding | downstream | 9059 | 15314507 ~ 15314714 (-) |
| G1520361 | NA | non-coding | downstream | 9870 | 15313161 ~ 15313903 (-) |
| G1520366 | NA | non-coding | upstream | 25 | 15324270 ~ 15324729 (-) |
| G1520369 | NA | non-coding | upstream | 1845 | 15326090 ~ 15327178 (-) |
| G1520398 | NA | non-coding | upstream | 83754 | 15407999 ~ 15408365 (-) |
| G1520408 | NA | non-coding | upstream | 91681 | 15415926 ~ 15416320 (-) |
| G1520339 | NA | other | downstream | 46752 | 15276063 ~ 15277021 (-) |
| LOC110495477 | fundc1 | other | downstream | 736214 | 14580962 ~ 14587615 (-) |
| LOC110495482 | LOC106575623 | other | downstream | 816455 | 14506227 ~ 14507592 (-) |
| G1519529 | LOC106575569 | other | downstream | 837677 | 14484679 ~ 14486096 (-) |
| G1518991 | NA | other | downstream | 1351484 | 13971081 ~ 13972538 (-) |
| G1521308 | NA | other | upstream | 223631 | 15547876 ~ 15548483 (-) |
| G1521387 | NA | other | upstream | 361656 | 15685901 ~ 15815957 (-) |
| LOC110497059 | donson | other | upstream | 546731 | 15869734 ~ 15873958 (-) |
