G1521535


Basic Information

Item Value
gene id G1521535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15962949 ~ 15963291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1742026
CCAGAGTCAGCCATTATCAATGGTAACCCTGGAGCAATTAAggtcaagggcacatcaacagatttttcatctTGTCGGCTCAGAgatttgaactagcaacctttctgttatttggcccaatgctctaactgttAGGCtacctctctaaccgctaggctacctctctaaccgctaggctacctctctaaccgctaggatacctg
>TU1742025
CCAGAGTCAGCCATTATCAATGGTAACCCTGGAGCAATTAAggtcaagggcacatcaacagatttttcatctTGTCGGCTCAGAgatttgaactagcaacctttctgttatttggcccaatgctctaactgttAGGCtacctctctaaccgctaggctacctctctaaccgctaggctacctgtctaaccgctaggctacctgtctaaccgctaggctacctctctatccgctaggctacctgtctaaccgctaggctac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1742026 False 203 lncRNA 0.47 2 15962949 15963291
TU1742025 True 260 lncRNA 0.49 2 15962972 15963291

Neighbor

gene id symbol gene type direction distance location
LOC110495653 LOC106574394 coding downstream 34176 15877503 ~ 15928773 (-)
LOC110497059 donson coding downstream 88991 15869734 ~ 15873958 (-)
LOC110495652 LOC106575579 coding downstream 114759 15843210 ~ 15848190 (-)
LOC110495638 LOC106575588 coding downstream 252581 15705622 ~ 15710368 (-)
LOC110495443 LOC106574666 coding downstream 358240 15601688 ~ 15604709 (-)
LOC110497061 LOC106574727 coding upstream 33675 15996966 ~ 16015860 (-)
LOC110495656 NA coding upstream 59275 16022467 ~ 16024382 (-)
LOC110495663 NA coding upstream 154810 16118101 ~ 16126127 (-)
LOC110495662 LOC106575549 coding upstream 171785 16135076 ~ 16164464 (-)
LOC110495664 NA coding upstream 205954 16169245 ~ 16171657 (-)
G1521533 NA non-coding downstream 2556 15960084 ~ 15960393 (-)
G1521531 NA non-coding downstream 4876 15957782 ~ 15958073 (-)
G1521525 NA non-coding downstream 16864 15945874 ~ 15946085 (-)
G1521523 NA non-coding downstream 20844 15941892 ~ 15942105 (-)
G1521517 NA non-coding downstream 43758 15917491 ~ 15919191 (-)
G1521536 NA non-coding upstream 54 15963345 ~ 15963676 (-)
G1521537 NA non-coding upstream 1407 15964698 ~ 15965525 (-)
G1521538 NA non-coding upstream 4144 15967435 ~ 15967658 (-)
G1521539 NA non-coding upstream 4638 15967929 ~ 15968178 (-)
G1521540 NA non-coding upstream 6754 15970045 ~ 15970275 (-)
G1521387 NA other downstream 203715 15685901 ~ 15815957 (-)
G1521308 NA other downstream 414466 15547876 ~ 15548483 (-)
LOC110495442 LOC106574707 other downstream 462505 15434412 ~ 15500787 (-)
G1521563 LOC106575575 other upstream 31673 15994964 ~ 15995317 (-)
G1521546 LOC100380633 other upstream 91837 16055128 ~ 16084966 (-)
G1521712 NA other upstream 454959 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 974361 16915423 ~ 16946521 (-)

Expression


Co-expression Network