G1521563 (LOC106575575)



Basic Information


Item Value
gene id G1521563
gene name LOC106575575
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15994964 ~ 15995317 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1742066
GGAatatcacaaacacaaacagcatTGATTTACCGCTTTCTTCTTCTTTCCTGAATTTCTGCCGTTTGCTGACCCTCTGGGCATCATGGTCATCCGTGTGCTCAGAGTGCTGTTGATCGCCCTGCTGAGTTCCTCCAGCGCTGACAGCATCTTCAGGATCTGGGCTCGTCTATCTGGACTGCTCGTCACCGGATCCATCTTCAATCGTCTATCCAGACTGCTGGTGGGTGTGGATGTCTTTTCTCGACCAACAGGGATGGTGGTCATCAGTGTGGTCTTCAGTGGTTTAGAAGCGTTGACCGTTGACGGTTCCGTTCTCTCTTGCACATTTGAGTCGACTCTAGCTGGACCTGT

Function


NR:

description
uncharacterized protein LOC110495654

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1742066 True 354 TUCP 0.51 1 15994964 15995317

Neighbor


gene id symbol gene type direction distance location
LOC110495653 LOC106574394 coding downstream 66191 15877503 ~ 15928773 (-)
LOC110497059 donson coding downstream 121006 15869734 ~ 15873958 (-)
LOC110495652 LOC106575579 coding downstream 146774 15843210 ~ 15848190 (-)
LOC110495638 LOC106575588 coding downstream 284596 15705622 ~ 15710368 (-)
LOC110495443 LOC106574666 coding downstream 390255 15601688 ~ 15604709 (-)
LOC110497061 LOC106574727 coding upstream 1649 15996966 ~ 16015860 (-)
LOC110495656 NA coding upstream 27249 16022467 ~ 16024382 (-)
LOC110495663 NA coding upstream 122784 16118101 ~ 16126127 (-)
LOC110495662 LOC106575549 coding upstream 139759 16135076 ~ 16164464 (-)
LOC110495664 NA coding upstream 173928 16169245 ~ 16171657 (-)
G1521562 NA non-coding downstream 889 15993634 ~ 15994075 (-)
G1521540 NA non-coding downstream 24689 15970045 ~ 15970275 (-)
G1521539 NA non-coding downstream 26786 15967929 ~ 15968178 (-)
G1521538 NA non-coding downstream 27306 15967435 ~ 15967658 (-)
G1521537 NA non-coding downstream 29439 15964698 ~ 15965525 (-)
G1521564 NA non-coding upstream 401 15995718 ~ 15995934 (-)
G1521565 NA non-coding upstream 17374 16012691 ~ 16013020 (-)
G1521566 NA non-coding upstream 17920 16013237 ~ 16013586 (-)
G1521572 NA non-coding upstream 37652 16032969 ~ 16033299 (-)
G1521575 NA non-coding upstream 41756 16037073 ~ 16037440 (-)
G1521387 NA other downstream 235730 15685901 ~ 15815957 (-)
G1521308 NA other downstream 446481 15547876 ~ 15548483 (-)
LOC110495442 LOC106574707 other downstream 494520 15434412 ~ 15500787 (-)
G1521546 LOC100380633 other upstream 59811 16055128 ~ 16084966 (-)
G1521712 NA other upstream 422933 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 942335 16915423 ~ 16946521 (-)
LOC118941063 LOC106574632 other upstream 1014065 17009382 ~ 17011759 (-)

Expression



Co-expression Network