G1521572



Basic Information


Item Value
gene id G1521572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16032969 ~ 16033299 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1742075
cacataagaTGTAGcatatttgttgtgcattttgttgtagagaattccagctaatactagctagcaacttactgtgtctggtggggggttcgtatattttgtacagtgcgtgagtgcagagttggatggtgagccgTGGATTGCATGACGGATTGCAATTTTGTGCTGTTTCTATCAGAATAAAGCTCCATGACTGGTGCTACAAGTTGGAGTTTGTGTggatgactgattgtacacaacgcaagaagaGAACTGTTACATACGTACATCCACCCACATGCAGCCACCTACACAAATGCACTCAAGTACATATGTTCATATacaaggattc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1742075 True 331 lncRNA 0.42 1 16032969 16033299

Neighbor


gene id symbol gene type direction distance location
LOC110495656 NA coding downstream 8591 16022467 ~ 16024382 (-)
LOC110497061 LOC106574727 coding downstream 17109 15996966 ~ 16015860 (-)
LOC110495653 LOC106574394 coding downstream 104196 15877503 ~ 15928773 (-)
LOC110497059 donson coding downstream 159011 15869734 ~ 15873958 (-)
LOC110495652 LOC106575579 coding downstream 184779 15843210 ~ 15848190 (-)
LOC110495663 NA coding upstream 84802 16118101 ~ 16126127 (-)
LOC110495662 LOC106575549 coding upstream 101777 16135076 ~ 16164464 (-)
LOC110495664 NA coding upstream 135946 16169245 ~ 16171657 (-)
LOC110495661 NA coding upstream 147911 16181210 ~ 16210360 (-)
LOC118941105 NA coding upstream 187895 16221194 ~ 16224343 (-)
G1521566 NA non-coding downstream 19383 16013237 ~ 16013586 (-)
G1521565 NA non-coding downstream 19949 16012691 ~ 16013020 (-)
G1521564 NA non-coding downstream 37035 15995718 ~ 15995934 (-)
G1521562 NA non-coding downstream 38894 15993634 ~ 15994075 (-)
G1521540 NA non-coding downstream 62694 15970045 ~ 15970275 (-)
G1521575 NA non-coding upstream 3774 16037073 ~ 16037440 (-)
G1521582 NA non-coding upstream 13644 16046943 ~ 16052241 (-)
G1521583 NA non-coding upstream 20720 16054019 ~ 16054411 (-)
G1521584 LOC106575572 non-coding upstream 21446 16054745 ~ 16055020 (-)
G1521550 NA non-coding upstream 54934 16088233 ~ 16090302 (-)
G1521563 LOC106575575 other downstream 37652 15994964 ~ 15995317 (-)
G1521387 NA other downstream 273735 15685901 ~ 15815957 (-)
LOC110495443 LOC106574666 other downstream 429064 15601688 ~ 15604709 (-)
G1521546 LOC100380633 other upstream 21829 16055128 ~ 16084966 (-)
G1521712 NA other upstream 384951 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 904353 16915423 ~ 16946521 (-)
LOC118941063 LOC106574632 other upstream 976083 17009382 ~ 17011759 (-)
G1522794 NA other upstream 1408360 17441659 ~ 17450178 (-)

Expression



Co-expression Network