G1521582


Basic Information

Item Value
gene id G1521582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16046943 ~ 16052241 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1742086
GTGTTGTACCTTTTCTGATCCATAGAGATGAATAGGCTTACTGTTTACCTTAGTCTTTTCTTCCTGAAAATGCTGATAGTTTTGATGCTATATCACACTATTTAAATCATCTCTGGGACTACGGATTAACATTTTTGCAGCCAACTCCAGTGCTTTGATGTGTAAATTGTATATGGATAAATGTGCATTGTTCATGTCAACACAATGAGATGAATATAATTAGTAATTTAATAAATAATCAGTTTTCCTCACCAGGTCAACTTCCTTTTTCAGATCGTCCATGTCCTTCTTCTCCTTTGCTTTCTTCACCTCCTTTTTGCTCTTTTTATTTCCATTGTCCTCGGAGGTCGCCGCCAGCTTATAATCATCTTTCCCCTTCTGTATATCAGAAGGCACGTTAATGATGAGAGAGTGTGAACTATCGATGTGCCTCTTTCCTAATGAGGGCTTAGATAAGGAGTGCATTCAGAACTTTATCAAATATAgaactttattttttaaaactaagaAGCAGCCATGACCCGAGGGCTAAACTTTTAATATGAACTGCAAaacaaaacaacagattttttttaaagttgaaAGGACACAATATAAGTAAATCCAAATCCTGATACTTAAAAGTGAAATCCAGACTTACTCCAAGCCCCATCCTTGCACTGCTGTTCTAGGACTCTCAATCCCAGTGTTCGACTAACTTTGACAAACACAGCCAGCATGGATGGGTGAACAGTGAAGTGCACCGTCTCTTGTCCTCCGGGGTGGAAACAAAGATCCCAAACAAAGGTATTTATGGCATCGCTCACCTCATCTCATACCAGCCCATAGGTGCAACTGGCTACAGAGACAAGGGAGGAGATAAATATGGAGATaaactgtgtgtgtctatgtgtgtggtgtgtgtctgtgtgtcaaatAGAGAACTGCTCCTTATTTAGAGCAAACATGACCAGTGTTTACACTTTTTAGAGGTGACCACTCCCTGCATTAAAAAAAACGATTGTGGACAAACAAACACCAAATGGAACTGGCACCTGTATTTGAAATGCTTGAGCCCCATCCGTTCTCACCGTTTCATTTGTTGCTACCCAGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1742086 True 1095 lncRNA 0.40 2 16046943 16052241

Neighbor

gene id symbol gene type direction distance location
LOC110495656 NA coding downstream 22565 16022467 ~ 16024382 (-)
LOC110497061 LOC106574727 coding downstream 31083 15996966 ~ 16015860 (-)
LOC110495653 LOC106574394 coding downstream 118170 15877503 ~ 15928773 (-)
LOC110497059 donson coding downstream 172985 15869734 ~ 15873958 (-)
LOC110495652 LOC106575579 coding downstream 198753 15843210 ~ 15848190 (-)
LOC110495663 NA coding upstream 65860 16118101 ~ 16126127 (-)
LOC110495662 LOC106575549 coding upstream 82835 16135076 ~ 16164464 (-)
LOC110495664 NA coding upstream 117004 16169245 ~ 16171657 (-)
LOC110495661 NA coding upstream 128969 16181210 ~ 16210360 (-)
LOC118941105 NA coding upstream 168953 16221194 ~ 16224343 (-)
G1521575 NA non-coding downstream 9503 16037073 ~ 16037440 (-)
G1521572 NA non-coding downstream 13644 16032969 ~ 16033299 (-)
G1521566 NA non-coding downstream 33357 16013237 ~ 16013586 (-)
G1521565 NA non-coding downstream 33923 16012691 ~ 16013020 (-)
G1521564 NA non-coding downstream 51009 15995718 ~ 15995934 (-)
G1521583 NA non-coding upstream 1778 16054019 ~ 16054411 (-)
G1521584 LOC106575572 non-coding upstream 2504 16054745 ~ 16055020 (-)
G1521550 NA non-coding upstream 35992 16088233 ~ 16090302 (-)
LOC118941103 NA non-coding upstream 181160 16228042 ~ 16236785 (-)
G1521683 NA non-coding upstream 282654 16334895 ~ 16335197 (-)
G1521563 LOC106575575 other downstream 51626 15994964 ~ 15995317 (-)
G1521387 NA other downstream 287709 15685901 ~ 15815957 (-)
LOC110495443 LOC106574666 other downstream 443038 15601688 ~ 15604709 (-)
G1521546 LOC100380633 other upstream 2887 16055128 ~ 16084966 (-)
G1521712 NA other upstream 366009 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 885411 16915423 ~ 16946521 (-)
LOC118941063 LOC106574632 other upstream 957141 17009382 ~ 17011759 (-)
G1522794 NA other upstream 1389418 17441659 ~ 17450178 (-)

Expression


Co-expression Network