Gene
RNA
| Item | Value |
|---|---|
| gene id | G1521584 |
| gene name | LOC106575572 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 16054745 ~ 16055020 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Na,K-ATPase alpha 1 isoform, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1742088 | True | 276 | lncRNA | 0.53 | 1 | 16054745 | 16055020 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495656 | NA | coding | downstream | 30367 | 16022467 ~ 16024382 (-) |
| LOC110497061 | LOC106574727 | coding | downstream | 38885 | 15996966 ~ 16015860 (-) |
| LOC110495653 | LOC106574394 | coding | downstream | 125972 | 15877503 ~ 15928773 (-) |
| LOC110497059 | donson | coding | downstream | 180787 | 15869734 ~ 15873958 (-) |
| LOC110495652 | LOC106575579 | coding | downstream | 206555 | 15843210 ~ 15848190 (-) |
| LOC110495663 | NA | coding | upstream | 63081 | 16118101 ~ 16126127 (-) |
| LOC110495662 | LOC106575549 | coding | upstream | 80056 | 16135076 ~ 16164464 (-) |
| LOC110495664 | NA | coding | upstream | 114225 | 16169245 ~ 16171657 (-) |
| LOC110495661 | NA | coding | upstream | 126190 | 16181210 ~ 16210360 (-) |
| LOC118941105 | NA | coding | upstream | 166174 | 16221194 ~ 16224343 (-) |
| G1521583 | NA | non-coding | downstream | 334 | 16054019 ~ 16054411 (-) |
| G1521582 | NA | non-coding | downstream | 2504 | 16046943 ~ 16052241 (-) |
| G1521575 | NA | non-coding | downstream | 17305 | 16037073 ~ 16037440 (-) |
| G1521572 | NA | non-coding | downstream | 21446 | 16032969 ~ 16033299 (-) |
| G1521566 | NA | non-coding | downstream | 41159 | 16013237 ~ 16013586 (-) |
| G1521550 | NA | non-coding | upstream | 33213 | 16088233 ~ 16090302 (-) |
| LOC118941103 | NA | non-coding | upstream | 178381 | 16228042 ~ 16236785 (-) |
| G1521683 | NA | non-coding | upstream | 279875 | 16334895 ~ 16335197 (-) |
| G1521692 | NA | non-coding | upstream | 290032 | 16345052 ~ 16345240 (-) |
| G1521691 | NA | non-coding | upstream | 291078 | 16346098 ~ 16346458 (-) |
| G1521563 | LOC106575575 | other | downstream | 59428 | 15994964 ~ 15995317 (-) |
| G1521387 | NA | other | downstream | 295511 | 15685901 ~ 15815957 (-) |
| LOC110495443 | LOC106574666 | other | downstream | 450840 | 15601688 ~ 15604709 (-) |
| G1521546 | LOC100380633 | other | upstream | 108 | 16055128 ~ 16084966 (-) |
| G1521712 | NA | other | upstream | 363230 | 16418250 ~ 16418918 (-) |
| LOC110495686 | LOC106574627 | other | upstream | 882632 | 16915423 ~ 16946521 (-) |
| LOC118941063 | LOC106574632 | other | upstream | 954362 | 17009382 ~ 17011759 (-) |
| G1522794 | NA | other | upstream | 1386639 | 17441659 ~ 17450178 (-) |
