G1521546 (LOC100380633)



Basic Information


Item Value
gene id G1521546
gene name LOC100380633
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16055128 ~ 16084966 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1742040
TACTGTTGTCAATTCACTCTGGGGAAATGAGACACTTACTTTAAGGATAGGAATACCGCTCTGTTCTGCCAGGAAGACGGCACGGTTACACAGGCCAGCGACTCTAGCCAGGGCAGCCCAGGTGGCAGAGCTCCTGTCAAAGGAGGTACCACTCTGGTTCTCTGTGGTGTCAGCCTCATGGATCTGGTTGTCGAACCACATGTGAGCCACGGTCATTCTGTTCTGAGTCAGGGTTCCGGTCTTGTCAGAGCAAATGGTGGAGGTGGAGCCCAAGGTCTCAACAGCTTCGAGATTCTTCACCAGGCAGTTCTTCTTGGCCATACGCTTGGCAGTCAGAGTTAAACACAAGTTACAGTGGCCAGGAGACCCTCAGGCACATTAGCGACAATGATTCCGATGAGGAAGATGACAGCTTCCAGCCAAGAGTATCCGAGGATGAGGGACAGGACAAAGAAAGACATGCCCAGAAAGACGGCCACACCGGTGATGATGTGGATGAAGTGCTCAATTTCAATGGAGATTGGGGTACGTCCGACTTCCAGGCCAGAGGCGAGGGTAGCAATACGACCCATAACAGTGCGGTCACCAGGTTCCGGTCTTGTCAGAGCAAATGGTGGAGGTGGAGCCAAGGGTCTCAACAGCTTCAAGATTCTTCACCAGGCAGTTCTTCTTGGCCATACGTTTGGCA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1742040 True 688 TUCP 0.52 3 16055128 16084966

Neighbor


gene id symbol gene type direction distance location
LOC110495656 NA coding downstream 30750 16022467 ~ 16024382 (-)
LOC110497061 LOC106574727 coding downstream 39268 15996966 ~ 16015860 (-)
LOC110495653 LOC106574394 coding downstream 126355 15877503 ~ 15928773 (-)
LOC110497059 donson coding downstream 181170 15869734 ~ 15873958 (-)
LOC110495652 LOC106575579 coding downstream 206938 15843210 ~ 15848190 (-)
LOC110495663 NA coding upstream 33135 16118101 ~ 16126127 (-)
LOC110495662 LOC106575549 coding upstream 50110 16135076 ~ 16164464 (-)
LOC110495664 NA coding upstream 84279 16169245 ~ 16171657 (-)
LOC110495661 NA coding upstream 96244 16181210 ~ 16210360 (-)
LOC118941105 NA coding upstream 136228 16221194 ~ 16224343 (-)
G1521584 LOC106575572 non-coding downstream 108 16054745 ~ 16055020 (-)
G1521583 NA non-coding downstream 717 16054019 ~ 16054411 (-)
G1521582 NA non-coding downstream 2887 16046943 ~ 16052241 (-)
G1521575 NA non-coding downstream 17688 16037073 ~ 16037440 (-)
G1521572 NA non-coding downstream 21829 16032969 ~ 16033299 (-)
G1521550 NA non-coding upstream 3267 16088233 ~ 16090302 (-)
LOC118941103 NA non-coding upstream 148435 16228042 ~ 16236785 (-)
G1521683 NA non-coding upstream 249929 16334895 ~ 16335197 (-)
G1521692 NA non-coding upstream 260086 16345052 ~ 16345240 (-)
G1521691 NA non-coding upstream 261132 16346098 ~ 16346458 (-)
G1521563 LOC106575575 other downstream 59811 15994964 ~ 15995317 (-)
G1521387 NA other downstream 295894 15685901 ~ 15815957 (-)
LOC110495443 LOC106574666 other downstream 451223 15601688 ~ 15604709 (-)
G1521712 NA other upstream 333284 16418250 ~ 16418918 (-)
LOC110495686 LOC106574627 other upstream 852686 16915423 ~ 16946521 (-)
LOC118941063 LOC106574632 other upstream 924416 17009382 ~ 17011759 (-)
G1522794 NA other upstream 1356693 17441659 ~ 17450178 (-)
LOC110528763 LOC106575486 other upstream 1557452 17640874 ~ 17671930 (-)

Expression



Co-expression Network