Gene
RNA
| Item | Value |
|---|---|
| gene id | G1521757 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 16479143 ~ 16479785 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: RCC1 and BTB domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1742279 | True | 472 | lncRNA | 0.56 | 2 | 16479143 | 16479785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495679 | LOC106575508 | coding | downstream | 2891 | 16473995 ~ 16476252 (-) |
| LOC110495671 | LOC105019845 | coding | downstream | 67634 | 16386046 ~ 16411509 (-) |
| LOC110495669 | LOC106575500 | coding | downstream | 95822 | 16368547 ~ 16383321 (-) |
| LOC110497063 | LOC106575501 | coding | downstream | 126176 | 16347536 ~ 16352967 (-) |
| LOC110495665 | NA | coding | downstream | 211781 | 16262725 ~ 16267362 (-) |
| LOC110495677 | LOC106575510 | coding | upstream | 15176 | 16494961 ~ 16516009 (-) |
| LOC110495681 | LOC106575511 | coding | upstream | 36882 | 16516667 ~ 16584000 (-) |
| LOC110495682 | tubgcp3 | coding | upstream | 105998 | 16584154 ~ 16610837 (-) |
| LOC110495684 | LOC106574593 | coding | upstream | 252540 | 16732325 ~ 16735884 (-) |
| LOC110495686 | LOC106574627 | coding | upstream | 435638 | 16915423 ~ 16946521 (-) |
| G1521740 | NA | non-coding | downstream | 29673 | 16449240 ~ 16449470 (-) |
| G1521738 | NA | non-coding | downstream | 31568 | 16447372 ~ 16447575 (-) |
| G1521725 | NA | non-coding | downstream | 47835 | 16431106 ~ 16431308 (-) |
| G1521711 | NA | non-coding | downstream | 65551 | 16412868 ~ 16413592 (-) |
| G1521695 | NA | non-coding | downstream | 124410 | 16354214 ~ 16354733 (-) |
| G1521763 | NA | non-coding | upstream | 5111 | 16484896 ~ 16486262 (-) |
| G1521772 | NA | non-coding | upstream | 33530 | 16513315 ~ 16513594 (-) |
| G1521810 | NA | non-coding | upstream | 84513 | 16564298 ~ 16564796 (-) |
| G1521827 | NA | non-coding | upstream | 131236 | 16611021 ~ 16611238 (-) |
| G1521712 | NA | other | downstream | 60225 | 16418250 ~ 16418918 (-) |
| G1521546 | LOC100380633 | other | downstream | 394177 | 16055128 ~ 16084966 (-) |
| LOC110495656 | NA | other | downstream | 454761 | 16022467 ~ 16024382 (-) |
| G1521563 | LOC106575575 | other | downstream | 483826 | 15994964 ~ 15995317 (-) |
| LOC110497059 | donson | other | downstream | 606677 | 15869734 ~ 15873958 (-) |
| LOC118941063 | LOC106574632 | other | upstream | 529597 | 17009382 ~ 17011759 (-) |
| G1522794 | NA | other | upstream | 961874 | 17441659 ~ 17450178 (-) |
| LOC110528763 | LOC106575486 | other | upstream | 1162633 | 17640874 ~ 17671930 (-) |
| LOC118941106 | LOC106575483 | other | upstream | 1208145 | 17685551 ~ 17702827 (-) |
