XLOC_003453 (adipor1a)


Basic Information

Item Value
gene id XLOC_003453
gene name adipor1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 24800156 ~ 24815193 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006757
AGTTTGAACTCGCCGTCTGACATACAGCAGCTTTCAACTCTTTATTTCTCCATCCTGCTGGTGTTTGGTGGCCATCCGGAAGAGATCACATTTCTATAACAACAGATCTGGATATCAGACTGAATGCAATTTCATAGAGAGGCAAACATCAGGAGGCTGGTTTAGACCTGCCTGTGTTCAAAGCTCCTGCTAGAGGGAACTGAAGTGGAGGCTTCAGAGGTCTGGGACGGGTCACAGGGCAGTCTACTGATGTCAGGCCAAATCAGGTCTGCCAGTCATGCAGACTGCCGGGTCACAGAGGAATGCCACGTTCCAGCCGACGTGGAGCTGATGGAACTCGGGCCCCTGCTGGAAGAAAATGGCCCCATGGGGGCCAAAGGACTCCAGTCAGAGGGAGCAGGTGCTCttgctgatgatgaagaggaggatgaagaagTTGGAGAAGTTCTGACTCTGCCACTGCAGGCTCACCACGCAATGGAGAAGATGGAGGAGTTTGTGCATAAGGTTTGGGAAGGGCGTTGGAGGGTCATTCCCTTTCACGTTCTGCCAGAGTGGCTAAAAGACAACGACTACCTCCTGCACGGTCACCGGCCCCCCATGCCCTCCTTCCGTGCCTGTTTTGGGAGCATTTTCAGGATCCACACAGAGACCGGGAATATCTGGACTCATTTGTTGGGGTTAATCTTATTTTTGTGCCTGGGCACACTTACCATGCTGAGGCCCAATATGTACTTCATGGCCCCGTTGCAGGAGAAAGTGGTGTTCGGGATGTTCTTCTTGGGTGCAGTGCTGTGCCTCAGCTTCTCCTGGTTATTTCACACTGTCTACTGCCATTCTGAGAAAGTCTCACGCACTTTCTCCAAacTGGACTACTCCGGCATTGCTCTGCTGATCATGGGCTCTTTTGTACCCTGGCTTTACTACTCGTTCTACTGCTCTCCTCAGCCGCGTCTCATCTACCTCACAATCGTCTGTGTGTTGGGCATCGCCGCTATAATCGTCGCCCAGTGGGATCGTTTCTCCACTCCACGACACAGGCCCACCAGAGCAGGAGTTTTCATGGGTCTTGGATTGAGCGGGATTGTCCCCACCATGCACTTCACCATCGAGGAGGGTTTCGTCAAGGCCACTACCGTTGGACAGATGGGCTGGTTCTATTTAATGGGCGCCATGTACATCACCGGCGCTGGATTGTATGCTGCACGAATCCCAGAGCGCTACTTCCCGGGCAAGTGTGATATTTGGTTTCACTCGCACCAGATATTTCACGTGCTAGTGGTGGCAGCGGCCTTCATTCATTTCTATGGGGTTTCCAACCTGCAGGAGTTTCGCTATGGTCTGGAAGGAGGCTGCACTGATGACACTCTCCTCTGAGAACTTGTCAAACTCGCTCGTTTCAATTAGGATTAATAGTACCCCATTTATACCCATTCCTTCGTTTTATTTACCTTTAAGTTTTTCCTGATTGATTTAACTTAACTTtcattatttcacttttttttattattattattctgttacATGATTTAGTTTCTTTTGAAGAAAGCATTTGTGTGGTCAAAGGTATCCGATGGCTGGAACATGATAACCCTTGTTatcatcaaactttaattttGAGCACAATCTGAAAGTTTGAACCGACATGTTTGTTTTGTAGTGAAAAGCACTTTCATTGAGCTGTAGAGATGCGCCCTCATAATATAATGcattttgtttcttattgtaAATGAACAATTGAGATCATTCGATGCACACCCAAAGTATTGCCCCAATATTAATAGAGCAATGTCTTTGAGATGTTTTGTTCATAGCGATTTAACGCACAAAGGGCATATAAAGGGTTTGAGGGTAAAATCTACCTGCTTTGAACACTTGCGCAATTTTTAACCTTTACTTCTAGGTCAAATAATAACGTAAACAGGTCAACTGTTGCACCTTACAGCACAGATATTGAATATCATTGTTATTAAGGCCTCTGCATGGATCCATCTGTGCAGTCTGTAAAGTATAAACTTTcctgtaaagtataaaaatattccTGTGCCTTAGGCCACTGGAAATAGGTTTAAAATAGATGGGCCAAAACTACAGTGTAGTAAATTTCATTAGTCTCAGACATGGCTAGTTAATTTACGTCGCAAGCAATccaatcaaattattattattattattattattattattattattacgaaaTGTTACATTAATAACAAGAGTTTGATCTTTGAACTTTCTCAGACtgctgtttgtaaaaaaaaaaatacataaaaataaaaaagtagtgtttgatcctttttaaatgaataagCTAACTATGTGGCTTTACCACGGACTAAACAATCCATATATCCATGTGTTATGTGTAGAGGTGGtaaatcatttgcatttatttgaaatgtgaactgtttaaataaatatttatggatCA
>TCONS_00006759
ACTGAATGCAATTTCATAGAGAGGCAAACATCAGGAGGCTGGTTTAGACCTGCCTGTGTTCAAAGCTCCTGCTAGAGGTAAGCCGTCTCTGTTGTTCCGCTTCACTGCTGTTGTCATGTCTTGACTTTGACAATAAAGTGTGCTGTTTTGATTGAATATTTAACTTTTGGCTGGCAGGGAACTGAAGTGGAGGCTTCAGAGGTCTGGGACGGGTCACAGGGCAGTCTACTGATGTCAGGCCAAATCAGGTCTGCCAGTCATGCAGACTGCCGGGTCACAGAGGAATGCCACGTTCCAGCCGACGTGGAGCTGATGGAACTCGGGCCCCTGCTGGAAGAAAATGGCCCCATGGGGGCCAAAGGACTCCAGTCAGAGGGAGCAGGTGCTCttgctgatgatgaagaggaggatgaagaagTTGGAGAAGTTCTGACTCTGCCACTGCAGGCTCACCACGCAATGGAGAAGATGGAGGAGTTTGTGCATAAGGTTTGGGAAGGGCGTTGGAGGGTCATTCCCTTTCACGTTCTGCCAGAGTGGCTAAAAGACAACGACTACCTCCTGCACGGTCACCGGCCCCCCATGCCCTCCTTCCGTGCCTGTTTTGGGAGCATTTTCAGGATCCACACAGAGACCGGGAATATCTGGACTCATTTGTTGGGGTTAATCTTATTTTTGTGCCTGGGCACACTTACCATGCTGAGGCCCAATATGTACTTCATGGCCCCGTTGCAGGAGAAAGTGGTGTTCGGGATGTTCTTCTTGGGTGCAGTGCTGTGCCTCAGCTTCTCCTGGTTATTTCACACTGTCTACTGCCATTCTGAGAAAGTCTCACGCACTTTCTCCAAacTGGACTACTCCGGCATTGCTCTGCTGATCATGGGCTCTTTTGTACCCTGGCTTTACTACTCGTTCTACTGCTCTCCTCAGCCGCGTCTCATCTACCTCACAATCGTCTGTGTGTTGGGCATCGCCGCTATAATCGTCGCCCAGTGGGATCGTTTCTCCACTCCACGACACAGGCCCACCAGAGCAGGAGTTTTCATGGGTCTTGGATTGAGCGGGATTGTCCCCACCATGCACTTCACCATCGAGGAGGGTTTCGTCAAGGCCACTACCGTTGGACAGATGGGCTGGTTCTATTTAATGGGCGCCATGTACATCACCGGCGCTGGATTGTATGCTGCACGAATCCCAGAGCGCTACTTCCCGGGCAAGTGTGATATTTGGTTTCACTCGCACCAGATATTTCACGTGCTAGTGGTGGCAGCGGCCTTCATTCATTTCTATGGGGTTTCCAACCTGCAGGAGTTTCGCTATGGTCTGGAAGGAGGCTGCACTGATGACACTCTCCTCTGAGAACTTGTCAAACTCGCTCGTTTCAATTAGGATTAATAGTACCCCATTTATACCCATTCCTTCGTTTTATTTACCTTTAAGTTTTTCCTGATTGATTTAACTTAACTTtcattatttcacttttttttattattattattctgttacATGATTTAGTTTCTTTTGAAGAAAGCATTTGTGTGGTCAAAGGTATCCGATGGCTGGAACATGATAACCCTTGTTatcatcaaactttaattttGAGCACAATCTGAAAGTTTGAACCGACATGTTTGTTTTGTAGTGAAAAGCACTTTCATTGAGCTGTAGAGATGCGCCCTCATAATATAATGcattttgtttcttattgtaAATGAACAATTGAGATCATTCGATGCACACCCAAAGTATTGCCCCAATATTAATAGAGCAATGTCTTTGAGATGTTTTGTTCATAGCGATTTAACGCACAAAGGGCATATAAAGGGTTTGAGGGTAAAATCTACCTGCTTTGAACACTTGCGCAATTTTTAACCTTTACTTCTAGGTCAAATAATAACGTAAACAGGTCAACTGTTGCACCTTACAGCACAGATATTGAATATCATTGTTATTAAGGCCTCTGCATGGATCCATCTGTGCAGTCTGTAAAGTATAAACTTTcctgtaaagtataaaaatattccTGTGCCTTAGGCCACTGGAAATAGGTTTAAAATAGATGGGCCAAAACTACAGTGTAGTAAATTTCATTAGTCTCAGACATGGCTAGTTAATTTACGTCGCAAGCAATccaatcaaattattattattattattattattattattattattacgaaaTGTTACATTAATAACAAGAGTTTGATCTTTGAACTTTCTCAGACtgctgtttgtaaaaaaaaaaatacataaaaataaaaaagtagtgtttgatcctttttaaatgaataagCTAACTATGTGGCTTTACCACGGACTAAACAATCCATATATCCATGTGTTATGTGTAGAGGTGGtaaatcatttgcatttatttgaaatgtgaactgtttaaataaatatttatggatCATGTGTTGTTTCTTTTATTTGGAGGATCCATATGATGTAACCCCTGgaggttcatttttatttttcagggtttttgtaGATATTAcaggttttaaaatgtttacctCTCCTTTTCTTGGTTTAAGGACTTAAATCTTATTTGTACATATTTAAGTTACATTCACAGTTAAAAACGTGCATCTTTTTTATTCTCCACTTCAAATATCTGAATATCTTTGAATCACGATACATTTACTTGTGATGCAGGCAAACTGAACAAAATTAagtattttcaattaaattaaaataaatatgtcaataaagtctccccgtgttcatgtgggttttctcccagtgctctggtttcccccacagtccaaagacatgtgctattggtgaaatgagtaagctaaattagccgtagtgtatgtgtgtgtatggatggttTGCAGtattgggttgtagctggaagagcatccgctgcataaaacacatgctggataagttggcttttcattctgctgtggtgacttctgATAAAAAAGGGATCAAGTCAAAAAAAAGATTGTCATTAAGGTATTTCAATTgatttttctgtttgatttttcCATTGGGGGAATATTAGTTCTTATTTTGaactattttaaattaaagtagCACTACTTCTCTCTTCATCAG
>TCONS_00006758
ACTGAATGCAATTTCATAGAGAGGCAAACATCAGGAGGCTGGTTTAGACCTGCCTGTGTTCAAAGCTCCTGCTAGAGGGAACTGAAGTGGAGGCTTCAGAGGTCTGGGACGGGTCACAGGGCAGTCTACTGATGTCAGGCCAAATCAGGTCTGCCAGTCATGCAGACTGCCGGGTCACAGAGGAATGCCACGTTCCAGCCGACGTGGAGCTGATGGAACTCGGGCCCCTGCTGGAAGAAAATGGCCCCATGGGGGCCAAAGGACTCCAGTCAGAGGGAGCAGGTGCTCttgctgatgatgaagaggaggatgaagaagTTGGAGAAGTTCTGACTCTGCCACTGCAGGCTCACCACGCAATGGAGAAGATGGAGGAGTTTGTGCATAAGGTTTGGGAAGGGCGTTGGAGGGTCATTCCCTTTCACGTTCTGCCAGAGTGGCTAAAAGACAACGACTACCTCCTGCACGGTCACCGGCCCCCCATGCCCTCCTTCCGTGCCTGTTTTGGGAGCATTTTCAGGATCCACACAGAGACCGGGAATATCTGGACTCATTTGTTGGGGTTAATCTTATTTTTGTGCCTGGGCACACTTACCATGCTGAGGCCCAATATGTACTTCATGGCCCCGTTGCAGGAGAAAGTGGTGTTCGGGATGTTCTTCTTGGGTGCAGTGCTGTGCCTCAGCTTCTCCTGGTTATTTCACACTGTCTACTGCCATTCTGAGAAAGTCTCACGCACTTTCTCCAAacTGGACTACTCCGGCATTGCTCTGCTGATCATGGGCTCTTTTGTACCCTGGCTTTACTACTCGTTCTACTGCTCTCCTCAGCCGCGTCTCATCTACCTCACAATCGTCTGTGTGTTGGGCATCGCCGCTATAATCGTCGCCCAGTGGGATCGTTTCTCCACTCCACGACACAGGCCCACCAGAGCAGGAGTTTTCATGGGTCTTGGATTGAGCGGGATTGTCCCCACCATGCACTTCACCATCGAGGAGGGTTTCGTCAAGGCCACTACCGTTGGACAGATGGGCTGGTTCTATTTAATGGGCGCCATGTACATCACCGGCGCTGGATTGTATGCTGCACGAATCCCAGAGCGCTACTTCCCGGGCAAGTGTGATATTTGGTTTCACTCGCACCAGATATTTCACGTGCTAGTGGTGGCAGCGGCCTTCATTCATTTCTATGGGGTTTCCAACCTGCAGGAGTTTCGCTATGGTCTGGAAGGAGGCTGCACTGATGACACTCTCCTCTGAGAACTTGTCAAACTCGCTCGTTTCAATTAGGATTAATAGTACCCCATTTATACCCATTCCTTCGTTTTATTTACCTTTAAGTTTTTCCTGATTGATTTAACTTAACTTtcattatttcacttttttttattattattattctgttacATGATTTAGTTTCTTTTGAAGAAAGCATTTGTGTGGTCAAAGGTATCCGATGGCTGGAACATGATAACCCTTGTTatcatcaaactttaattttGAGCACAATCTGAAAGTTTGAACCGACATGTTTGTTTTGTAGTGAAAAGCACTTTCATTGAGCTGTAGAGATGCGCCCTCATAATATAATGcattttgtttcttattgtaAATGAACAATTGAGATCATTCGATGCACACCCAAAGTATTGCCCCAATATTAATAGAGCAATGTCTTTGAGATGTTTTGTTCATAGCGATTTAACGCACAAAGGGCATATAAAGGGTTTGAGGGTAAAATCTACCTGCTTTGAACACTTGCGCAATTTTTAACCTTTACTTCTAGGTCAAATAATAACGTAAACAGGTCAACTGTTGCACCTTACAGCACAGATATTGAATATCATTGTTATTAAGGCCTCTGCATGGATCCATCTGTGCAGTCTGTAAAGTATAAACTTTcctgtaaagtataaaaatattccTGTGCCTTAGGCCACTGGAAATAGGTTTAAAATAGATGGGCCAAAACTACAGTGTAGTAAATTTCATTAGTCTCAGACATGGCTAGTTAATTTACGTCGCAAGCAATccaatcaaattattattattattattattattattattattattacgaaaTGTTACATTAATAACAAGAGTTTGATCTTTGAACTTTCTCAGACtgctgtttgtaaaaaaaaaaatacataaaaataaaaaagtagtgtttgatcctttttaaatgaataagCTAACTATGTGGCTTTACCACGGACTAAACAATCCATATATCCATGTGTTATGTGTAGAGGTGGtaaatcatttgcatttatttgaaatgtgaactgtttaaataaatatttatggatCATGTGTTGTTTCTTTTATTTGGAGGATCCATATGATGTAACCCCTGgaggttcatttttatttttcagggtttttgtaGATATTAcaggttttaaaatgtttacctCTCCTTTTCTTGGTTTAAGGACTTAAATCTTATTTGTACATATTTAAGTTACATTCACAGTTAAAAACGTGCATCTTTTTTATTCTCCACTTCAAATATCTGAATATCTTTGAATCACGATACATTTACTTGTGATGCAGGCAAACTGAACAAAATTAagtattttcaattaaattaaaataaatatgtcaataaagtctccccgtgttcatgtgggttttctcccagtgctctggtttcccccacagtccaaagacatgtgctattggtgaaatgagtaagctaaattagccgtagtgtatgtgtgtgtatggatggttTGCAGtattgggttgtagctggaagagcatccgctgcataaaacacatgctggataagttggcttttcattctgctgtggtgacttctgATAAAAAAGGGATCAAGTCAAAAAAAAGATTGTCATTAAGGTATTTCAATTgatttttctgtttgatttttcCATTGGGGGAATATTAGTTCTTATTTTGaactattttaaattaaagtagCACTACTTCTCTCTTCATCAG

Function

symbol description
adipor1a Predicted to enable signaling receptor activity. Predicted to be involved in adiponectin-activated signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including brain; digestive system; eye; fat cell; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in breast cancer; macular degeneration; and prostate adenocarcinoma. Orthologous to human ADIPOR1 (adiponectin receptor 1).

GO:

id name namespace
GO:0033211 adiponectin-activated signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0038023 signaling receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-169 Predicted to enable signaling receptor activity. Predicted to be involved in adiponectin-activated signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including brain; digestive system; eye; fat cell; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in breast cancer; macular degeneration; and prostate adenocarcinoma. Orthologous to human ADIPOR1 (adiponectin receptor 1).

Ensembl:

ensembl_id ENSDARG00000002912

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006757 False 2431 mRNA 0.43 9 24800156 24814537
TCONS_00006759 False 3069 mRNA 0.41 7 24804556 24815193
TCONS_00006758 True 2969 mRNA 0.41 8 24804556 24815193

Neighbor

gene id symbol gene type direction distance location
XLOC_003452 cyb5r1 coding upstream 481 24786378 ~ 24799675 (+)
XLOC_003451 rnpep coding upstream 17038 24758967 ~ 24783118 (+)
XLOC_003450 inavab coding upstream 43340 24716837 ~ 24756816 (+)
XLOC_003449 gpr25 coding upstream 95719 24703108 ~ 24704437 (+)
XLOC_003448 syt6b coding upstream 136125 24620742 ~ 24664031 (+)
XLOC_003454 rabif coding downstream 474 24815667 ~ 24817637 (+)
XLOC_003455 kdm5ba coding downstream 4131 24819324 ~ 24851464 (+)
XLOC_003456 ipo9 coding downstream 36478 24851671 ~ 24876621 (+)
XLOC_003457 shisa4 coding downstream 62627 24877820 ~ 24888595 (+)
XLOC_003458 lmod1b coding downstream 73977 24889170 ~ 24894907 (+)
XLOC_003369 CR854846.2 misc upstream 8677074 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 12088160 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 12105893 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 12114557 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 12120128 12679732 ~ 12680028 (+)
XLOC_003447 BX072564.1 non-coding upstream 219042 24580579 ~ 24581114 (+)
XLOC_003442 NA non-coding upstream 489511 24120291 ~ 24310645 (+)
XLOC_003444 AL831791.1 non-coding upstream 621218 24178823 ~ 24178938 (+)
XLOC_003443 NA non-coding upstream 622505 24176418 ~ 24177651 (+)
XLOC_003441 FP102969.1 non-coding upstream 648939 24116083 ~ 24151217 (+)
XLOC_003463 NA non-coding downstream 244269 25059462 ~ 25060098 (+)
XLOC_003466 NA non-coding downstream 366664 25181857 ~ 25228195 (+)
XLOC_003467 NA non-coding downstream 441619 25256812 ~ 25266235 (+)
XLOC_003487 NA non-coding downstream 1014177 25829370 ~ 25830337 (+)
XLOC_003488 CR318604.1 non-coding downstream 1262754 26077947 ~ 26078061 (+)

Expression


Co-expression Network