Gene
RNA
| Item | Value |
|---|---|
| gene id | G1522078 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 17192275 ~ 17192511 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1742658 | True | 237 | lncRNA | 0.39 | 1 | 17192275 | 17192511 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495692 | tm182 | coding | upstream | 122997 | 17065877 ~ 17069278 (+) |
| LOC110495691 | LOC106574621 | coding | upstream | 182736 | 17005029 ~ 17009539 (+) |
| LOC110495688 | LOC106574622 | coding | upstream | 190319 | 16987740 ~ 17001956 (+) |
| LOC110497065 | LOC106574631 | coding | upstream | 208127 | 16973083 ~ 16984148 (+) |
| LOC110495683 | LOC106575518 | coding | upstream | 509198 | 16613649 ~ 16685491 (+) |
| LOC118941044 | NA | coding | downstream | 255927 | 17448438 ~ 17469192 (+) |
| LOC110527364 | LOC105019822 | coding | downstream | 358743 | 17551254 ~ 17554607 (+) |
| mrps9 | LOC106574616 | coding | downstream | 399934 | 17592445 ~ 17610875 (+) |
| LOC110527370 | LOC106575456 | coding | downstream | 419021 | 17611532 ~ 17620435 (+) |
| LOC110527374 | LOC106592210 | coding | downstream | 431275 | 17623786 ~ 17631132 (+) |
| G1521240 | NA | non-coding | upstream | 247186 | 16944726 ~ 16945089 (+) |
| G1521235 | NA | non-coding | upstream | 255018 | 16935961 ~ 16937257 (+) |
| G1521234 | NA | non-coding | upstream | 257136 | 16934919 ~ 16935139 (+) |
| G1521230 | LOC106574625 | non-coding | upstream | 259808 | 16927179 ~ 16932467 (+) |
| G1522081 | NA | non-coding | downstream | 2492 | 17195003 ~ 17195262 (+) |
| G1522091 | NA | non-coding | downstream | 11921 | 17204432 ~ 17204648 (+) |
| G1522099 | NA | non-coding | downstream | 22817 | 17215328 ~ 17215962 (+) |
| G1522146 | NA | non-coding | downstream | 71541 | 17264052 ~ 17264563 (+) |
| G1522196 | NA | non-coding | downstream | 124686 | 17317197 ~ 17317529 (+) |
| LOC110495674 | LOC106575504 | other | upstream | 723852 | 16454118 ~ 16468453 (+) |
| G1520748 | NA | other | upstream | 1253457 | 15938230 ~ 15938818 (+) |
| G1520742 | NA | other | upstream | 1269376 | 15919157 ~ 15922899 (+) |
| G1520649 | NA | other | upstream | 1376270 | 15756493 ~ 15816005 (+) |
| G1522415 | LOC106575491 | other | downstream | 573708 | 17766219 ~ 17766694 (+) |
| G1522437 | LOC106575479 | other | downstream | 647158 | 17839669 ~ 17844014 (+) |
| G1522438 | NA | other | downstream | 663630 | 17856141 ~ 17860614 (+) |
| G1522684 | NA | other | downstream | 1186576 | 18379087 ~ 18380258 (+) |
