G1522099


Basic Information

Item Value
gene id G1522099
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17215328 ~ 17215962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1742679
gctcatgtttcttggcccaagcaagtctcttcttattatttgtgtcattttagtagtggtttctttgcagcaatttgaccatgaaggcctgattcacacagtctcctttgaacagttgatgttgagatgtgtctgttacttgaactctgtgaagcatttatttgggctgcaatttctgaggctggtaagtcTGGGtctccattcctgtggtggtcctcatggtCCTCATGAAACTTTCAAaggtcttaaaataatgatggactgtcatttctctttgcttatttgagctgttcttgccataatatggacttggtcttttaccaaatagggctatcttctgtataccaaccctaccttgtcacaacacaactgattggctcaaacgcattaagaaggaaagaaattccacaaattaacttttaacaaggcatacctgttaattgaaatgcattccaggtgactacctcatgaagctggttgagagaatgccaagagtgatcaaagctgtcatcagggcaaatGTAGGCTActttaagaatctcaaatgtgaagtatgttttgatttgtttaacacttttttttggttactacatgattcaatatgtgttatttcatagttttgatgtcttcactac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1742679 True 635 lncRNA 0.38 1 17215328 17215962

Neighbor

gene id symbol gene type direction distance location
LOC110495692 tm182 coding upstream 146050 17065877 ~ 17069278 (+)
LOC110495691 LOC106574621 coding upstream 205789 17005029 ~ 17009539 (+)
LOC110495688 LOC106574622 coding upstream 213372 16987740 ~ 17001956 (+)
LOC110497065 LOC106574631 coding upstream 231180 16973083 ~ 16984148 (+)
LOC110495683 LOC106575518 coding upstream 532251 16613649 ~ 16685491 (+)
LOC118941044 NA coding downstream 232476 17448438 ~ 17469192 (+)
LOC110527364 LOC105019822 coding downstream 335292 17551254 ~ 17554607 (+)
mrps9 LOC106574616 coding downstream 376483 17592445 ~ 17610875 (+)
LOC110527370 LOC106575456 coding downstream 395570 17611532 ~ 17620435 (+)
LOC110527374 LOC106592210 coding downstream 407824 17623786 ~ 17631132 (+)
G1522091 NA non-coding upstream 10680 17204432 ~ 17204648 (+)
G1522081 NA non-coding upstream 20066 17195003 ~ 17195262 (+)
G1522078 NA non-coding upstream 22817 17192275 ~ 17192511 (+)
G1521240 NA non-coding upstream 270239 16944726 ~ 16945089 (+)
G1522146 NA non-coding downstream 48090 17264052 ~ 17264563 (+)
G1522196 NA non-coding downstream 101235 17317197 ~ 17317529 (+)
G1522197 NA non-coding downstream 101616 17317578 ~ 17317808 (+)
G1522206 NA non-coding downstream 126205 17342167 ~ 17342395 (+)
G1522233 NA non-coding downstream 176180 17392142 ~ 17392381 (+)
LOC110495674 LOC106575504 other upstream 746905 16454118 ~ 16468453 (+)
G1520748 NA other upstream 1276510 15938230 ~ 15938818 (+)
G1520742 NA other upstream 1292429 15919157 ~ 15922899 (+)
G1520649 NA other upstream 1399323 15756493 ~ 15816005 (+)
G1522415 LOC106575491 other downstream 550257 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 623707 17839669 ~ 17844014 (+)
G1522438 NA other downstream 640179 17856141 ~ 17860614 (+)
G1522684 NA other downstream 1163125 18379087 ~ 18380258 (+)

Expression


Co-expression Network