G1522100


Basic Information

Item Value
gene id G1522100
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17215376 ~ 17215874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1742680
catttgagattcttaaagTAGCCTACatttgccctgatgacagctttgatcactcttggcattctctcaaccagcttcatgaggtagtcacctggaatgcatttcaattaacaggtatgccttgttaaaagttaatttgtggaatttctttccttcttaatgcgtttgagccaatcagttgtgttgtgacaaggtagggttggtatacagaagatagccctatttggtaaaagaccaagtccatattatggcaagaacagctcaaataagcaaagagaaatgacagtccatcattattttaagacctTTGAAAGTTTCATGAGGaccatgaggaccaccacaggaatggagaCCCAgacttaccagcctcagaaattgcagcccaaataaatgcttcacagagttcaagtaacagacacatctcaacatcaactgttcaaaggagactgtgtgaatcaggccttcatggtcaaattgctgcaaagaaaccactactaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1742680 True 499 lncRNA 0.40 1 17215376 17215874

Neighbor

gene id symbol gene type direction distance location
LOC110495689 LOC106574620 coding downstream 161894 17012127 ~ 17053482 (-)
LOC118941063 LOC106574632 coding downstream 203617 17009382 ~ 17011759 (-)
LOC110495687 LOC106574624 coding downstream 242986 16971053 ~ 16972390 (-)
LOC110495685 eif5b coding downstream 245461 16947767 ~ 16969915 (-)
LOC110495686 LOC106574627 coding downstream 268855 16915423 ~ 16946521 (-)
LOC110527367 NA coding upstream 360378 17576252 ~ 17592356 (-)
trnae-uuc-58 NA coding upstream 405652 17621526 ~ 17621597 (-)
trnae-uuc-59 NA coding upstream 407625 17623499 ~ 17623570 (-)
LOC110527378 LOC106575453 coding upstream 414998 17630872 ~ 17633564 (-)
LOC110528763 LOC106575486 coding upstream 425493 17640874 ~ 17671930 (-)
G1522090 NA non-coding downstream 11466 17203211 ~ 17203910 (-)
G1522089 NA non-coding downstream 13730 17201353 ~ 17201646 (-)
G1522068 NA non-coding downstream 40618 17174491 ~ 17174758 (-)
G1522026 NA non-coding downstream 182892 17031949 ~ 17032484 (-)
G1521992 NA non-coding downstream 280058 16935056 ~ 16935318 (-)
G1522108 NA non-coding upstream 7878 17223752 ~ 17223989 (-)
G1522110 NA non-coding upstream 8249 17224123 ~ 17224364 (-)
G1522149 NA non-coding upstream 53175 17269049 ~ 17269481 (-)
G1522159 NA non-coding upstream 71637 17287511 ~ 17287736 (-)
G1522170 NA non-coding upstream 77878 17293752 ~ 17294037 (-)
G1521712 NA other downstream 796458 16418250 ~ 16418918 (-)
G1521546 LOC100380633 other downstream 1130410 16055128 ~ 16084966 (-)
LOC110495656 NA other downstream 1190994 16022467 ~ 16024382 (-)
G1522794 NA other upstream 225785 17441659 ~ 17450178 (-)
LOC118941106 LOC106575483 other upstream 472056 17685551 ~ 17702827 (-)
LOC110510546 LOC106575482 other upstream 526093 17719504 ~ 17815003 (-)
LOC118941107 NA other upstream 836106 18051980 ~ 18054354 (-)

Expression


Co-expression Network