G1522197


Basic Information

Item Value
gene id G1522197
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17317578 ~ 17317808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1742786
ctgtctgtgtgggtggaccaattcagtttgtctgtgatgtgtacgccgaggaacttaaaacttactaccctctccactactgttccatcgatgtggataggggggtgttccctctgctgtttcctgaagtccacaatcatctccttagttttgttgacgttgagtgtgaggttattttcctggcaccacactccgagggccctcacctcctccctgtaggccgtctcgtca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1742786 True 231 lncRNA 0.51 1 17317578 17317808

Neighbor

gene id symbol gene type direction distance location
LOC110495692 tm182 coding upstream 248300 17065877 ~ 17069278 (+)
LOC110495691 LOC106574621 coding upstream 308039 17005029 ~ 17009539 (+)
LOC110495688 LOC106574622 coding upstream 315622 16987740 ~ 17001956 (+)
LOC110497065 LOC106574631 coding upstream 333430 16973083 ~ 16984148 (+)
LOC110495683 LOC106575518 coding upstream 634501 16613649 ~ 16685491 (+)
LOC118941044 NA coding downstream 130630 17448438 ~ 17469192 (+)
LOC110527364 LOC105019822 coding downstream 233446 17551254 ~ 17554607 (+)
mrps9 LOC106574616 coding downstream 274637 17592445 ~ 17610875 (+)
LOC110527370 LOC106575456 coding downstream 293724 17611532 ~ 17620435 (+)
LOC110527374 LOC106592210 coding downstream 305978 17623786 ~ 17631132 (+)
G1522196 NA non-coding upstream 49 17317197 ~ 17317529 (+)
G1522146 NA non-coding upstream 53015 17264052 ~ 17264563 (+)
G1522099 NA non-coding upstream 101616 17215328 ~ 17215962 (+)
G1522091 NA non-coding upstream 112930 17204432 ~ 17204648 (+)
G1522081 NA non-coding upstream 122316 17195003 ~ 17195262 (+)
G1522206 NA non-coding downstream 24359 17342167 ~ 17342395 (+)
G1522233 NA non-coding downstream 74334 17392142 ~ 17392381 (+)
G1522278 NA non-coding downstream 138934 17456742 ~ 17461988 (+)
G1522291 NA non-coding downstream 178727 17496535 ~ 17496866 (+)
G1522295 NA non-coding downstream 182744 17500552 ~ 17500753 (+)
LOC110495674 LOC106575504 other upstream 849155 16454118 ~ 16468453 (+)
G1520748 NA other upstream 1378760 15938230 ~ 15938818 (+)
G1520742 NA other upstream 1394679 15919157 ~ 15922899 (+)
G1520649 NA other upstream 1501573 15756493 ~ 15816005 (+)
G1522415 LOC106575491 other downstream 448411 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 521861 17839669 ~ 17844014 (+)
G1522438 NA other downstream 538333 17856141 ~ 17860614 (+)
G1522684 NA other downstream 1061279 18379087 ~ 18380258 (+)

Expression


Co-expression Network