G1522838



Basic Information


Item Value
gene id G1522838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17517224 ~ 17542661 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1743592
ATTGTTGACTGTGCGTGATATATGCTATTCATATGAGCTTGTGTGgtcccattctggtgggaagtcTGATTCATGTGGGGATTATGTGTTGAGCTCTTATGGATCTGTCCCTGTTCCTACAGAGTCAGGACCATTTGTTTCTAAATGGGTTTACATACATCTACTGTGCCTGTTtttgccgctctctctctccctccatccagccttgaaacacacacacacacacacacacgcacac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1743592 True 238 lncRNA 0.46 2 17517224 17542661

Neighbor


gene id symbol gene type direction distance location
LOC110495689 LOC106574620 coding downstream 463742 17012127 ~ 17053482 (-)
LOC118941063 LOC106574632 coding downstream 505465 17009382 ~ 17011759 (-)
LOC110495687 LOC106574624 coding downstream 544834 16971053 ~ 16972390 (-)
LOC110495685 eif5b coding downstream 547309 16947767 ~ 16969915 (-)
LOC110495686 LOC106574627 coding downstream 570703 16915423 ~ 16946521 (-)
LOC110527367 NA coding upstream 33591 17576252 ~ 17592356 (-)
trnae-uuc-58 NA coding upstream 78865 17621526 ~ 17621597 (-)
trnae-uuc-59 NA coding upstream 80838 17623499 ~ 17623570 (-)
LOC110527378 LOC106575453 coding upstream 88211 17630872 ~ 17633564 (-)
LOC110528763 LOC106575486 coding upstream 98706 17640874 ~ 17671930 (-)
G1522834 NA non-coding downstream 13014 17503989 ~ 17504210 (-)
G1522830 NA non-coding downstream 26896 17490123 ~ 17490328 (-)
G1522818 NA non-coding downstream 55265 17456765 ~ 17461959 (-)
G1522219 NA non-coding downstream 144847 17372155 ~ 17372377 (-)
G1522214 NA non-coding downstream 149998 17367018 ~ 17367226 (-)
G1522896 NA non-coding upstream 80048 17622709 ~ 17623011 (-)
G1522902 NA non-coding upstream 95436 17638097 ~ 17638315 (-)
G1522905 NA non-coding upstream 105315 17647976 ~ 17649289 (-)
G1522860 NA non-coding upstream 142137 17684798 ~ 17685352 (-)
G1522794 NA other downstream 67046 17441659 ~ 17450178 (-)
G1521712 NA other downstream 1098306 16418250 ~ 16418918 (-)
G1521546 LOC100380633 other downstream 1432258 16055128 ~ 16084966 (-)
LOC118941106 LOC106575483 other upstream 145269 17685551 ~ 17702827 (-)
LOC110510546 LOC106575482 other upstream 199306 17719504 ~ 17815003 (-)
LOC118941107 NA other upstream 509319 18051980 ~ 18054354 (-)
G1523149 fndc3b other upstream 889432 18432093 ~ 18436052 (-)

Expression



Co-expression Network