G1522905


Basic Information

Item Value
gene id G1522905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17647976 ~ 17649289 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1743671
tcctgtgttgttgtataggtggagtaatgggctacttacaggatgtatagtcctagtcctgtgttgttgtataggtggagtaatgggctacttaaaggatgtatagtcctagtcctgtgttgttttataggtggagtaatgggctacttacaggatgtatagtcctagtcctgtgttgttgtataggtggagtaatgagctacttacaggatgtatagtcctagtcctgtgttgttgtataggtggagtaatgggctacttacaggatgtatagtcctagtcctgtgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1743671 True 290 lncRNA 0.42 2 17647976 17649289

Neighbor

gene id symbol gene type direction distance location
LOC110527378 LOC106575453 coding downstream 14412 17630872 ~ 17633564 (-)
trnae-uuc-59 NA coding downstream 24406 17623499 ~ 17623570 (-)
trnae-uuc-58 NA coding downstream 26379 17621526 ~ 17621597 (-)
LOC110527367 NA coding downstream 55620 17576252 ~ 17592356 (-)
LOC110495689 LOC106574620 coding downstream 594494 17012127 ~ 17053482 (-)
LOC110527371 LOC106575485 coding upstream 25918 17675207 ~ 17684594 (-)
LOC118941106 LOC106575483 coding upstream 36262 17685551 ~ 17702827 (-)
LOC110510546 LOC106575482 coding upstream 70215 17719504 ~ 17815003 (-)
LOC110527386 LOC106575479 coding upstream 193078 17842367 ~ 17861866 (-)
LOC100135945 LOC106575464 coding upstream 270796 17920085 ~ 17938169 (-)
G1522902 NA non-coding downstream 9661 17638097 ~ 17638315 (-)
G1522896 NA non-coding downstream 24965 17622709 ~ 17623011 (-)
G1522824 NA non-coding downstream 98653 17537512 ~ 17549323 (-)
G1522860 NA non-coding upstream 35509 17684798 ~ 17685352 (-)
G1522931 NA non-coding upstream 86294 17735583 ~ 17735789 (-)
G1522934 NA non-coding upstream 99266 17748555 ~ 17748797 (-)
G1522945 NA non-coding upstream 153329 17802618 ~ 17802841 (-)
G1522794 NA other downstream 197798 17441659 ~ 17450178 (-)
LOC118941063 LOC106574632 other downstream 636598 17009382 ~ 17011759 (-)
LOC110495686 LOC106574627 other downstream 705382 16915423 ~ 16946521 (-)
G1521712 NA other downstream 1229058 16418250 ~ 16418918 (-)
G1521546 LOC100380633 other downstream 1563010 16055128 ~ 16084966 (-)
LOC118941107 NA other upstream 402691 18051980 ~ 18054354 (-)
G1523149 fndc3b other upstream 782804 18432093 ~ 18436052 (-)
ghs-r ghsr other upstream 796298 18445083 ~ 18447303 (-)

Expression


Co-expression Network