G1522860


Basic Information

Item Value
gene id G1522860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17684798 ~ 17685352 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1743617
agagagattacagatCTCTCGCTGGAACCAGGGAGTGTGATGGTCTTCGGTGTGCTGGGGTCGTTTATGGGTCAGATCCACACACCATAGATTACTTCTGCTTTTTTTATGCATTGGAAATAGTAACAACTGTTTCAAACCACTTAATACAACAAGaacaaaaacaagcaaaaaaCACATGGGTCAAGTATGTGAAATGCTTTTGAATAATTGATTGATTACCAAGCGTGGAGTTTCATTGGTTTCCATTGTATCCAGCATGCTAATCTGCTGCTGAAGTATGAAGAACGTTGACATTTTGACCCAGCAGGTCTGGTTCAGAGTCCCGAAGTTACCGAAATCACACAGCTGCTCCTCCTCAGTCAGCCCTGTAATAGACAAATTATGCCATCTGTTGGCCAATGCATGAACTTACAACCCTGTATGGAATTTGTATTTTCTGAACTACATGAACTGATTGTGAAACAGGAAAGAAGCAGCATTCGTTGTTTAGTTGCACAGGTTTGCGAGTCAGCTATCCAATACTAGAACATAATAAATCAATGTGTGTCAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1743617 True 555 lncRNA 0.41 1 17684798 17685352

Neighbor

gene id symbol gene type direction distance location
LOC110527371 LOC106575485 coding downstream 204 17675207 ~ 17684594 (-)
LOC110528763 LOC106575486 coding downstream 12868 17640874 ~ 17671930 (-)
LOC110527378 LOC106575453 coding downstream 51234 17630872 ~ 17633564 (-)
trnae-uuc-59 NA coding downstream 61228 17623499 ~ 17623570 (-)
trnae-uuc-58 NA coding downstream 63201 17621526 ~ 17621597 (-)
LOC118941106 LOC106575483 coding upstream 199 17685551 ~ 17702827 (-)
LOC110510546 LOC106575482 coding upstream 34152 17719504 ~ 17815003 (-)
LOC110527386 LOC106575479 coding upstream 157015 17842367 ~ 17861866 (-)
LOC100135945 LOC106575464 coding upstream 234733 17920085 ~ 17938169 (-)
LOC110528772 LOC105019808 coding upstream 254585 17939937 ~ 18012067 (-)
G1522905 NA non-coding downstream 35509 17647976 ~ 17649289 (-)
G1522902 NA non-coding downstream 46483 17638097 ~ 17638315 (-)
G1522896 NA non-coding downstream 61787 17622709 ~ 17623011 (-)
G1522824 NA non-coding downstream 135475 17537512 ~ 17549323 (-)
G1522931 NA non-coding upstream 50231 17735583 ~ 17735789 (-)
G1522934 NA non-coding upstream 63203 17748555 ~ 17748797 (-)
G1522945 NA non-coding upstream 117266 17802618 ~ 17802841 (-)
G1522956 NA non-coding upstream 120689 17806041 ~ 17806465 (-)
G1522794 NA other downstream 234620 17441659 ~ 17450178 (-)
LOC118941063 LOC106574632 other downstream 673420 17009382 ~ 17011759 (-)
LOC110495686 LOC106574627 other downstream 742204 16915423 ~ 16946521 (-)
G1521712 NA other downstream 1265880 16418250 ~ 16418918 (-)
LOC118941107 NA other upstream 366628 18051980 ~ 18054354 (-)
G1523149 fndc3b other upstream 746741 18432093 ~ 18436052 (-)
ghs-r ghsr other upstream 760235 18445083 ~ 18447303 (-)

Expression


Co-expression Network