Gene
RNA
| Item | Value |
|---|---|
| gene id | G1522401 |
| gene name | LOC106591655 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 17724115 ~ 17733070 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| glutamate receptor ionotropic, NMDA 3B-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1743031 | False | 1016 | lncRNA | 0.43 | 4 | 17724115 | 17733070 |
| TU1743032 | True | 691 | lncRNA | 0.46 | 2 | 17732057 | 17733070 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519433 | NA | coding | upstream | 7196 | 17715037 ~ 17716919 (+) |
| LOC118936563 | LOC106591654 | coding | upstream | 9079 | 17705378 ~ 17715036 (+) |
| LOC110527382 | LOC106575451 | coding | upstream | 83325 | 17638633 ~ 17640790 (+) |
| LOC110527377 | LOC100136320 | coding | upstream | 87531 | 17631679 ~ 17636584 (+) |
| LOC110527374 | LOC106592210 | coding | upstream | 92983 | 17623786 ~ 17631132 (+) |
| LOC110528768 | LOC106591671 | coding | downstream | 98380 | 17831450 ~ 17839017 (+) |
| LOC110527394 | LOC106591034 | coding | downstream | 309663 | 18042733 ~ 18053825 (+) |
| LOC110528909 | LOC106595470 | coding | downstream | 324632 | 18057702 ~ 18075184 (+) |
| LOC110495693 | LOC105019803 | coding | downstream | 343130 | 18076200 ~ 18093990 (+) |
| atr | atr | coding | downstream | 364493 | 18097563 ~ 18129363 (+) |
| G1522396 | NA | non-coding | upstream | 6069 | 17717697 ~ 17718046 (+) |
| G1522348 | LOC106575485 | non-coding | upstream | 39583 | 17675210 ~ 17684532 (+) |
| G1522385 | NA | non-coding | upstream | 52175 | 17670456 ~ 17671940 (+) |
| G1522372 | NA | non-coding | upstream | 79376 | 17642830 ~ 17644739 (+) |
| G1522410 | LOC100194703 | non-coding | downstream | 14375 | 17747445 ~ 17747757 (+) |
| G1522412 | NA | non-coding | downstream | 18637 | 17751707 ~ 17753430 (+) |
| G1522413 | NA | non-coding | downstream | 27663 | 17760733 ~ 17764467 (+) |
| G1522414 | NA | non-coding | downstream | 32844 | 17765914 ~ 17766156 (+) |
| G1522416 | NA | non-coding | downstream | 38309 | 17771379 ~ 17771651 (+) |
| LOC110495674 | LOC106575504 | other | upstream | 1255692 | 16454118 ~ 16468453 (+) |
| G1520748 | NA | other | upstream | 1785297 | 15938230 ~ 15938818 (+) |
| G1520742 | NA | other | upstream | 1801216 | 15919157 ~ 15922899 (+) |
| LOC110495644 | LOC106575583 | other | upstream | 1924234 | 15796262 ~ 15801788 (+) |
| G1522415 | LOC106575491 | other | downstream | 33149 | 17766219 ~ 17766694 (+) |
| G1522437 | LOC106575479 | other | downstream | 106599 | 17839669 ~ 17844014 (+) |
| G1522438 | NA | other | downstream | 123071 | 17856141 ~ 17860614 (+) |
| G1522684 | NA | other | downstream | 646017 | 18379087 ~ 18380258 (+) |
| LOC110495728 | LOC106574584 | other | downstream | 861264 | 18594324 ~ 18595682 (+) |
